Gene RoseRS_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1393 
Symbol 
ID5208345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1702602 
End bp1703030 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID640595004 
ProductTadE family protein 
Protein accessionYP_001275743 
Protein GI148655538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000426497 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000776129 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGGAAGTA TGCTCTCACA GCCATCGGTG TTCATCAGGC GATTGACACG TGATGAGTGC 
GGCGTCGAGT TGATCGAATT CCTGGGATTC GTCCCGATTG CGATGCTTGT AATCCTGATC
GCCTGGCAGT TCATCATGGT CGCCTATACC GGTATCGTTG CCGCTGCAGC GGCGCGTGAG
GGCGCCCGCG CCGCTGTGAC TCTCGAGGAC GTCGGGCGTG CAGTCATCTG GGCGAGTCCA
GGTTTCGACG GTCGTCGTCA GTGGCGCGTG TCGGGGGGGT GCCCCTACTA TGCAGGGAAT
GCGGTGACGG TTCAGGTTCA ACTGGAGACG CCACATGTCG TCTTTCCGTT TCTTGGGGCG
CTCGGTCGCT ATCCCAGGGT GACTGCTGAG GCGAGTATGC GGTGTGAACC ACCGTTTGAC
GCGCCCTGA
 
Protein sequence
MGSMLSQPSV FIRRLTRDEC GVELIEFLGF VPIAMLVILI AWQFIMVAYT GIVAAAAARE 
GARAAVTLED VGRAVIWASP GFDGRRQWRV SGGCPYYAGN AVTVQVQLET PHVVFPFLGA
LGRYPRVTAE ASMRCEPPFD AP