Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1336 |
Symbol | |
ID | 5208288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1646038 |
End bp | 1647432 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594950 |
Product | hypothetical protein |
Protein accession | YP_001275689 |
Protein GI | 148655484 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.965224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.73412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCAC ACTGCTCCCC TTATCAGCGT AGCAGCATGC TGGTTGTGGC GCTTGCGACT GCGCTGCTCC TCCTCATTCT GCCGGACGAA AACGCAACAG CCCAACAGAG CGGCGGTCCG CTGTATGCTG TCGAGGTCAA CGGGATTGTA ACGGCGCCAA CGATCGATTA CTTGCGGCGG GCAGTGCAGA TCGCCGAAGC TTCGAGCGCC GATGCACTGA TTATTTCGTA CAGCAGCACC GGCGGCGTAC TGCGCGAGGT GCGTGTTTTT GCGGCTGAGA TTGCGCAGGC GCGCGTGCCG ATTGTCGTGT TCATCACCCC GCGTGGCACG CAGGCGGGTC CTGCCGGCGC ACTGTTCGTG ACCGCAGCGC ATGTGAGTGC GCTTGCCCCT GATACCAGTT TTGGCAGTCC CTTTCCCCTT GCGCAGGTGG ATGAAACCCT CAGTCAGCAG ACCCGCGATC TCTTGCTCGA TAACGTCAGT GCTCAAATGA GGAAATGGAA TGAGACCCGG GGACGGAATG CCGACTGGAT CGACCGCGCG GTTCGGGAAG GGGTCATTCT CAACAATCAG CAGGCGATCA GTCTTGATCC GCCTGCCGTC GATCTGGTGG CAGCCGATCA GCGTGAACTG TTGACCCTAC TCGAAGGACG CACGGTGACG CTCGATGATG GTCGAACGGT TCGTATTTCG GCGCTTGGAC GAACGCCGAC GTTCATCGAG CCGACGCTGT TCGAGAGTCT CCGCCTGGCG CTTGCCGATC CGACGGTTGC GTTTGCGCTC CTGGTGCTTG GATCAATGGC AATCTATCTT GAGTTGAACA CACCCGGCGT CGGGCTGTTT GCCGGCGCAG GGTTAGTGCT GCTGCTGGGC GCTGCTGCCG GATTTCTGGT TCTTCCAATC GTGTGGTGGG GTATGACGCT GGTGATCCTT GGTCTGGTAT TGATCGGCGC GGAGTTCGTC GCGCCAACCC ATGGCGGTTT GATGATTACC GGTCTGGCGA TGCTCGGTGT TGGCGGCGGG AATCTGATCG ATGCCACGCA GGCGCCCGGT GCAGGCGTCG CCTGGTGGGC GCTCCTGATC GTGATCGGCG GGATTGCAGC AACCGCAGCG GCAGGGCTGG CGCTGGCGCT GCGCAGTCGC AAGCGCCCGG CGGCTATCGG GACCGAGGCG CTCATCGGGC GTCTGGCGCA GGTGCGGCGG CGGTTGGACC CGCGTGGCAT GGTGTTCGTC GAGGGTGCGC TGTGGCAGGC GATCAGCGAA TCCGAACCGG TGGAAGTCGG CGATTGGGTG CGGGTGGTTG CAGTGCATAA TCTGCAACTG ATTGTGCGTC CGCTCGAAAG CGAGGAGCCA GCTCCGCAGG AAGCGCAACC GCCTTCCGGG GGACGCGTCG TGTAG
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Protein sequence | MPAHCSPYQR SSMLVVALAT ALLLLILPDE NATAQQSGGP LYAVEVNGIV TAPTIDYLRR AVQIAEASSA DALIISYSST GGVLREVRVF AAEIAQARVP IVVFITPRGT QAGPAGALFV TAAHVSALAP DTSFGSPFPL AQVDETLSQQ TRDLLLDNVS AQMRKWNETR GRNADWIDRA VREGVILNNQ QAISLDPPAV DLVAADQREL LTLLEGRTVT LDDGRTVRIS ALGRTPTFIE PTLFESLRLA LADPTVAFAL LVLGSMAIYL ELNTPGVGLF AGAGLVLLLG AAAGFLVLPI VWWGMTLVIL GLVLIGAEFV APTHGGLMIT GLAMLGVGGG NLIDATQAPG AGVAWWALLI VIGGIAATAA AGLALALRSR KRPAAIGTEA LIGRLAQVRR RLDPRGMVFV EGALWQAISE SEPVEVGDWV RVVAVHNLQL IVRPLESEEP APQEAQPPSG GRVV
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