Gene RoseRS_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1305 
Symbol 
ID5208257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1608502 
End bp1609584 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content58% 
IMG OID640594920 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001275659 
Protein GI148655454 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CGATTATCGG TCTTGCCAAC AGCGGTAAAA CGACGGTTTT CAACGCGCTG 
ACCGGCGGCA CAGCAGAAAC GACAGTCTAT AGTTCCGGTC AGTTGACTCC GAACCTGGCG
ACGGTGAAGG TTCCCGACTC GCGCCTGGAG GTTCTGGCGC GCATGTTCAA TCCGAAGAAA
GTAACCTATG CCGATGTGCA GTACATCGAC ATTGGCGGGT TGAGCAGCGG CGCACGGGAA
AGTGGCGGAT TGCCTCCGGT AGTGCTCAAT TACATCAGCG GCGCCGATGC GCTGCTCCAC
GTCGTGCGTG CGTTTCAGGA CGAACGGGTG CCGCATCCGG ATGGCAGCGT TGATGTGCAA
CGCGACATCG AAGCGGTCGA TCTGGAACTC GCGTTTTCCG ATCTGGCGAT TATCGAGCGC
CGCCTGGCGC GTTTGAATGC CGAGATTGGC AAGATGTCGG CAAAAGAGCG CGAGAATCGT
CTGATCGAAC GCGATGCGCT GGTGCGCATT CAGTCTGCGC TGGAGAGCGG CACACCTATC
CGCGACATCG ATCTGAGCAG TGAGGAAGAG CGTCTGCTGC GCGGGTATCA GTTTCTCACC
GCCAAGCCGT TGCTCCTTGC AATCAATATC GGCGAAGATC AACTGACGAA TCCGCCGACG
ATCCGCTACG ATCATCGCCG TAGCGGGGTA GCAACGCTCT GCGGTAAAAT CGAGGCTGAA
CTTGCCCAAC TCGATGACGA CGAAGCCCGC GCGTTTATGG ACGATCTTGG CATCACCGAA
CCAGCGCGCA ACCGGGTGAT CGAACTCTCC TACGAACTGC TTGGTCTCAT CAGTTTCCTC
ACCGCCGGTC CTGATGAGGT GCGCGCCTGG ACGATCCGCC GCGGGACACC AGCAGTCGAA
GCCGCTGGCG TCATTCATTC CGATATTCAG CGCGGCTTCA TCCGCGCCGA AGTCGTCGCT
TACGATGATC TGGTGCGCGC TGGCAGCATG GCAGAAGCCC GAAAGCACGG TCATGTGCGT
ATGGAGGGGA AGCAGTACCT CGTGCAGGAC GGCGATGTGT GCCATTTTCT GTTCAACATC
TGA
 
Protein sequence
MKIAIIGLAN SGKTTVFNAL TGGTAETTVY SSGQLTPNLA TVKVPDSRLE VLARMFNPKK 
VTYADVQYID IGGLSSGARE SGGLPPVVLN YISGADALLH VVRAFQDERV PHPDGSVDVQ
RDIEAVDLEL AFSDLAIIER RLARLNAEIG KMSAKERENR LIERDALVRI QSALESGTPI
RDIDLSSEEE RLLRGYQFLT AKPLLLAINI GEDQLTNPPT IRYDHRRSGV ATLCGKIEAE
LAQLDDDEAR AFMDDLGITE PARNRVIELS YELLGLISFL TAGPDEVRAW TIRRGTPAVE
AAGVIHSDIQ RGFIRAEVVA YDDLVRAGSM AEARKHGHVR MEGKQYLVQD GDVCHFLFNI