| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1289 |
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| Symbol | |
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| ID | 5208241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1593346 |
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| End bp | 1593894 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594904 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001275643 |
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| Protein GI | 148655438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.611954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAG AGCGACCTTC CGCTGATGAA GTGCTGTTAA TCGGCAAGGT GATCGACGCA
TTTGGTCTGC GCGGCGAGAT CAAAATTCGC GCGATAACCG ATCAGGTCGA TCACCTCCGC
CGTCACGTGC GGACGGTCTT TCTGGGAGAA GAGCGTCGTC CGTTCACGTT GCAACGCGTT
CACGAACCAA AGGCGGGGAT CCTTATTCTT TCGTTGGGCG GCGTGACCGA CCGGACGACC
GCTGAAGCCC TGCGTGGCGC AGAAGTGACG ATCCGTGAGT GCGACGCCGC GCCGCTCGAC
CAGGATGAGT ATTTTATTCA TCAACTGTAC GGTCTGCGGG TGATTGAGAG CGGCGGCGGC
GAAATTGGCG TCGTGCGCGA GGTGGTGCAG ACCGGCGCGA ATGATGTGAT CGTTGTGGAA
CGCCAGGGGC GTTCCGATAC GTTGCTGCCG ATGATCCACG ATGTGGTCGA GCGTCTCGAT
GTTGCAGCCG GGCAGATCGT GGTGCGTCTG CTGCCTGGCT TGATCGATGA TGATAATCAG
GAGGGTTGA
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| Protein sequence | MMEERPSADE VLLIGKVIDA FGLRGEIKIR AITDQVDHLR RHVRTVFLGE ERRPFTLQRV
HEPKAGILIL SLGGVTDRTT AEALRGAEVT IRECDAAPLD QDEYFIHQLY GLRVIESGGG
EIGVVREVVQ TGANDVIVVE RQGRSDTLLP MIHDVVERLD VAAGQIVVRL LPGLIDDDNQ
EG
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