| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1274 |
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| Symbol | |
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| ID | 5208226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1577230 |
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| End bp | 1578621 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640594889 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001275628 |
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| Protein GI | 148655423 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCT TGAAACGAAT CGGCGCAACT TCCGGTGCGA CCGGGCAATT GCCTGGCACA
CCCGCCACCC CGGCTGCGCC AGCGCGCCTT GGAACACCAC CGGCTCAACG CCGTGAAGAG
GATAACAGCG TTATCGAACT GCGACAGCGC GTTCAGCAAC GCCTGATCAA TGAGCTCGAT
CCCAAACTCG ACCTCTCCAA TGTCGCCAGA GTGCGACAGC AGGTTGAGGA GATTTTCAAT
ACTATCCTCG ACAGCGAAAA TATCGTGTTG TCGCGCTCGG AACGCGCCCG CCTGTTTGAA
TCGATTGCCG CCGACATTCT GGGCTTCGGT CCGCTCCAGG AGTTGCTCAA CGACCCGGAG
ATCTCCGAGA TCATGGTGAA CGGACCAAAA AAGGTCTATG TGGAAAAGCG CGGTAAGATT
CAATTGACCG ACGTCACCTT CGTCGATGAA CAACACGTGC TGCGGGTGAT CGACCGTATC
GTCGCGCCGC TTGGACGCCG TATCGATGAG TCATCGCCGA TGGTCGATGC GCGCCTCCCC
GACGGCAGCC GCGTCAACGC AGTCATTCGA CCAATCGCCC TCTGTGGACC GACGATCAGC
ATCCGTAAGT TCCGCAAGGA AGGCATCACG ATCGACGACC TGATCCGCTT CGGATCGCTC
ACCAGCGAGA TGGCGGAGTT CCTCTCCGCC TGCGTGCGCG CATCGCTCAA CATCGTCGTC
TCCGGCGGCA CCGGCTCCGG TAAAACGACC ATGCTCAATG TGCTCTCGTC GTTCATCCCC
GACGATGAGC GCATTATTAC CGTCGAAAAT GCGGCAGAAT TGCAACTGCG CCAGGAGCAC
GTGGTGCCGC TCGAGTCGCG TCCGCCGAAC GTTGAAGGCA AAGGCGAGAT CAGTATTCGC
GACCTGGTGA TCAATACCCT GCGTATGCGA CCGGAGCGGA TCGTGGTCGG CGAGTGCCGC
GGCGGTGAGG CGCTGGAGAT GCTTCAGGCG ATGAATACCG GTCACGATGG CTCGATGACG
ACGCTGCACG CTAACTCGCC ACGTGACGCC ATTGCGCGTA TCGAAACGAT GTGCTTGATG
GCCGGAATGG ACCTGCCGGT GCGCGCCATC CGTGAGCAGA TTGCTTCGGC AGTCAACCTG
ATCGTGCAAC TGGCGCGCCT GAAAGACGGG TCGCGCAAGG TTATCTACAT CACCGAAGTG
CAGGGCATGG AGGGTGATGT CGTCGTGCTT TCGGATATTT TCGTCTTTGA GCAGCAGGGG
CTTGATGAAC GCGGCAAGAT TATCGGTCAG TTGAAGCCAA CCGGCATCAG ACCACGGTTT
ATTGACCGTT TCGAGGAGCG CAACATTTAT CTGCCGCCGA ATATCTTCGG CTATGGCAGC
TCTTTCATCT GA
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| Protein sequence | MSLLKRIGAT SGATGQLPGT PATPAAPARL GTPPAQRREE DNSVIELRQR VQQRLINELD
PKLDLSNVAR VRQQVEEIFN TILDSENIVL SRSERARLFE SIAADILGFG PLQELLNDPE
ISEIMVNGPK KVYVEKRGKI QLTDVTFVDE QHVLRVIDRI VAPLGRRIDE SSPMVDARLP
DGSRVNAVIR PIALCGPTIS IRKFRKEGIT IDDLIRFGSL TSEMAEFLSA CVRASLNIVV
SGGTGSGKTT MLNVLSSFIP DDERIITVEN AAELQLRQEH VVPLESRPPN VEGKGEISIR
DLVINTLRMR PERIVVGECR GGEALEMLQA MNTGHDGSMT TLHANSPRDA IARIETMCLM
AGMDLPVRAI REQIASAVNL IVQLARLKDG SRKVIYITEV QGMEGDVVVL SDIFVFEQQG
LDERGKIIGQ LKPTGIRPRF IDRFEERNIY LPPNIFGYGS SFI
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