Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1228 |
Symbol | |
ID | 5208180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1507610 |
End bp | 1508374 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594844 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001275583 |
Protein GI | 148655378 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.699958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACA TCAACCATCA CCACCCATCA GCGCCGCCAA TGCCGGAAGC GCTGCGACTC CTCAGCGATG AGACGCGCTG GCGTCTGATC GGGGAACTGC GCTGGAGCGA CCGGCAGGTA GGCGAGCTCT GCGAGCGGCT CGATCTGCCG CAGAACCTGG TTTCCTACCA TCTTGGCATT CTCCGTCAGG CGCGCCTGGT GCGCACCCAC CGGAGTGACG CCGATGGACG GGTGCTGTAC TACGCACTCG ATCTTGCTGC GTTGCAGCAG CAGTGGCAGT CGGTCGGCAG TGCGCTGGCG CTTGGACATA CCGCTCCACC AGCGGTCATC ATCGGTCCGG TGCTGTTCGT CTGCACCCAC AACAGCGCGC GCTCACAGAT TGCCGAAGCG TGGCTGCGGC ACCTGAGCGG CGGGCGCGTG ATCGCGCGCA GCGCCGGAAC CTTTCCCGCC ACGGTGCAAC CGCTGGCAGT GCAGGTGATG GCGGAGGCAG GCATCGACAT CGGGTATCAA CAGGCCAAGG GGCTTGCCGA TGTCGCTGCG CCTGCGCCTG CAATCGTGGT AACCGTATGT GATCTGGCGC GTGAAGAGTG CGCAGCCACG CTCCACGCGC CATTCCAGCT GCACTGGAGC ATCCCCGATC CGGTCATGGC ATCAGGGGGT GAGGCTGAAC GTCTGGCTGC ATTCCGCGCC GCCCGTGATG AATTGCGCAT GCGCGTCGCG GGGTTGCTCG ACCTGTTGTC GGTGGTTTCT ATCAATACAA ACTGA
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Protein sequence | MTDINHHHPS APPMPEALRL LSDETRWRLI GELRWSDRQV GELCERLDLP QNLVSYHLGI LRQARLVRTH RSDADGRVLY YALDLAALQQ QWQSVGSALA LGHTAPPAVI IGPVLFVCTH NSARSQIAEA WLRHLSGGRV IARSAGTFPA TVQPLAVQVM AEAGIDIGYQ QAKGLADVAA PAPAIVVTVC DLAREECAAT LHAPFQLHWS IPDPVMASGG EAERLAAFRA ARDELRMRVA GLLDLLSVVS INTN
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