| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1216 |
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| Symbol | |
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| ID | 5208168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1494462 |
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| End bp | 1496255 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594834 |
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| Product | ABC transporter related |
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| Protein accession | YP_001275573 |
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| Protein GI | 148655368 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.791805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACC GGCAATCTCG CAATTCACGA TGCGCGGTGG ATGTCATACC GGTGCGCACG
GTTGACTGGC GTCGCTTGCT GCACTATCTG CACCCGTATC GTCGCCACAT GCTGGGTGCG
CTGCTGGCGC TTGCGGGGGC AAGCGCGATC AATCTCGGTT TTCCACTGGT CATCGTGCAG
TTGCTGGAGG CTGTTTTGCA GCAGGGCGAC CAGACGTTGC TGACGAATCT GACGCTGGCG
TTGATCGTCC TCTTTTTTGT GCAGGCGTTC CTGACGTTTC TCCAGGGGTA TATCTTGAAC
GTCGTCGGTG AGCGGATCGT GCTTGATATG CGGGTTCAGT TGTACCGCCA CCTGCACACG
CTCTCGTTGA GTTTCTTTGC CAGCCAGCGC GTCGGCGAAA TCGTGTCGCG CATCTCCAGC
GATGTTACAC AGGTGCGGTC GATCCTGACG AATAATGTCA CCCAATTCCT TTCGAGCATC
GTCGCGCTGT TCGGTGCGAT CATCATCGTC TTTCTGCTCA ATCCGCGCCT GGTGGGGTTT
GTGCTGGCGC TGGCGATCAG CGTCGTCACC GTGGCGGCGG TCTTTGGTCG CTGGCTGCAA
CGCTTCAGCA CCCGGGTGCA GGATGAACTG GCAGATGCGA CGGTGGCGGT CGAAGAGGGG
TTGCAAGGGG TGCGGGTGGT CAAAAGTTAC GTCCGTGAGT CGTATGAAAC CGGGCTTTAT
GAGCGCGCGA TGCAGCGCAC CCTGAAAGCG GCGCTGCGTC TGGCGCTGCT GCGATCGGCA
TTTGGCGGAC TGATGGCGTT CCTGGGGTTC AGCGGCATCG CGGCGATCCT GTGGTTCAGC
GGCAGCGAGG TGCTGGCGGG GCGCATGTCA TTTGCGACGA TCAGCGGTTT TCTGATCTAT
GCGATTACCA TTGGCGCCAG CCTGGCGCAA CTCTCCGGGT TGTACGGTCA GTTCCGCGAA
GCAGTGGGCG CAGTGCGGCG CGTGTTCGAG ATTCTCGATA CGCAACCGAC AATCAAAGAT
GCGCCGGACG CGCGCGTTCT GCCGCCGGTG CACGGCGAGA TCGTGTTCGA TGATGTTTCG
TTTGAGTACG AAACCGGTCA GGGAGTGTTG CACAACATTG CGCTTGCTAT CCAACCGGGC
GAGATCGTGG CGCTGGTTGG TCCGAGCGGG GCAGGTAAAA GTACGCTGTT CAATCTCATA
CCGCGCTTTT ACGACCCGAC ATCCGGGCGG GTGCTGATCG ACGGGTATGA TCTGCGTGAT
GTGACGCAGC GCAGTCTGCG GGAGCAGATC GGTCTGGTTC CGCAGGAAAC GATGCTGTTC
GGCGGGACGA TCCGCGAGAA TATCGTCTAT GGGAAACTGG ATGCGAGCGG AGAGGAGATC
ATCGCGGCGG CAAAGGCTGC GAATGCGCAC GATTTCATCA TGGCGATGCC GCGCGGATAC
GAGACGCTGG TGGGGGAACG CGGCATCAAG TTGAGCGGCG GGCAGCGTCA GCGGATCGCT
ATTGCTCGTG TGATGCTGAA GAACCCGCGC ATTCTGCTGC TCGACGAAGC AACCAGTTCA
CTCGATAGCG AGTCGGAGGC GCTGGTGCAG GAAGCGTTCG AGCGCCTGAT GCGCGGGCGC
ACGTCGGTCA TTATCGCGCA CCGTCTCAGC ACCGTCTCGA TTGCCCACCG GATCGTTGTG
CTCAACCACG GGCGCATTGT CGAGCAGGGG ACGCACGAGG AGTTACTGGC GAACCAGGGA
TTGTATGCGC GCCTCTATGC CTTGCAGTTC CGCGAGGGAG TGATGGTGGG GTGA
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| Protein sequence | MINRQSRNSR CAVDVIPVRT VDWRRLLHYL HPYRRHMLGA LLALAGASAI NLGFPLVIVQ
LLEAVLQQGD QTLLTNLTLA LIVLFFVQAF LTFLQGYILN VVGERIVLDM RVQLYRHLHT
LSLSFFASQR VGEIVSRISS DVTQVRSILT NNVTQFLSSI VALFGAIIIV FLLNPRLVGF
VLALAISVVT VAAVFGRWLQ RFSTRVQDEL ADATVAVEEG LQGVRVVKSY VRESYETGLY
ERAMQRTLKA ALRLALLRSA FGGLMAFLGF SGIAAILWFS GSEVLAGRMS FATISGFLIY
AITIGASLAQ LSGLYGQFRE AVGAVRRVFE ILDTQPTIKD APDARVLPPV HGEIVFDDVS
FEYETGQGVL HNIALAIQPG EIVALVGPSG AGKSTLFNLI PRFYDPTSGR VLIDGYDLRD
VTQRSLREQI GLVPQETMLF GGTIRENIVY GKLDASGEEI IAAAKAANAH DFIMAMPRGY
ETLVGERGIK LSGGQRQRIA IARVMLKNPR ILLLDEATSS LDSESEALVQ EAFERLMRGR
TSVIIAHRLS TVSIAHRIVV LNHGRIVEQG THEELLANQG LYARLYALQF REGVMVG
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