Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1166 |
Symbol | rplO |
ID | 5208117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1446113 |
End bp | 1446637 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640594783 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_001275523 |
Protein GI | 148655318 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000441483 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.095301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC ATGATTTGAA ACCGGCGCCA GGAGCGCACC GTGAGCGCAA GCGCATCGGG CGCGGCATCG GCTCGGGCAA GGGCAAAACC GGCGGCAAGG GCATGATGGG TCAGAAGGCG CGCTCCGGTC CCAAGCCATC GCCATCGTTC GAAGGCGGGC AGATGCGTAT TACCCGCAAA ATGCCCAAAC TGCGCGGCTT CAAGAATCGC TGGCGGGTTG AGTATCAGGT GATCAACATC GGTCAACTGA ACGATGTTCC CGATGGAACC GAACTGACCA TTGAGGAGAT GGTCGCTCAG GGATGGATCC ATCCGGCAAA GCCGGTCAAG ATTCTTGGGG ATGGCGAACT GGAGCGGAAA CTGACGATCC ACGCGCATAA GTTCAGCGCC AGTGCGCGGG CGCGGATCGA AGCAGCTGGC GGCGCCGCCA TCGAAACGCC ATGGGTTGTG GAACGGCGCA GTCGTAGCCG GGGACCCAAC CCGCCCCGGC ATAGCCGCAA GGCGGAAACG CCGCAGAAGG CGTGA
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Protein sequence | MKLHDLKPAP GAHRERKRIG RGIGSGKGKT GGKGMMGQKA RSGPKPSPSF EGGQMRITRK MPKLRGFKNR WRVEYQVINI GQLNDVPDGT ELTIEEMVAQ GWIHPAKPVK ILGDGELERK LTIHAHKFSA SARARIEAAG GAAIETPWVV ERRSRSRGPN PPRHSRKAET PQKA
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