Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1165 |
Symbol | |
ID | 5208116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1444711 |
End bp | 1446063 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640594782 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_001275522 |
Protein GI | 148655317 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000330141 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.11389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGT CGGTTGTCAA TGCGCTCCGG TTGCCCGATC TGCGTCAGCG CATCCTGTTT ACGCTGGCAA TGCTGTTGCT CTTCCGGTTG ATCGCCCATA TTCCTGTGCC AAACATCGAT CCGACGGCGC TGGAAAGTCT GCGGATCGCG CTGCAGGGGA ATCAACTGGC ACAGTTGCTT AATATTTTTG CCGGCGGCGC ACTGCAGAAC CTGTCGGTGG CAGCGATGGG GGTCTATCCG TACATCACTG CCCAGATCAT TCTGCAACTG CTCGTGCCGC TCATCCCGGC GCTGGAAGAA TTGCGCAAAG AGGGTGAACA GGGGCGCATG CGCCTGAACC GCCTTACGTT TTACCTGACC ATTCCGATGG CGCTGTTGCA GGCCTATGGG CAGACGCTGA CACTCGAACG CAGCCTTGGC ACAGGGCAGG CGCTCTTCCA GACGCCGTTC GATATTGTGA ATAATTTCTT TCCGACCTTT ACCATTCTGG TGAGCATGCT GGCGGGAACG ATGCTGCTGG TGTGGCTCGG CGAACAGATC CAGGAACGCG GGATCGGCAA CGGCGTGTCG ATGATCATCT TCGCCGGGAT TGTCGCCGGG TTGCCAGGGT TGATCATTCA GGCGTTTACA ACCGTCGAAC TGGGAGGCGT CGAGCAAATT ATCGGGCTGG TGTCGTTCCT GGTCATCGCT CTGGGAACGA TTGTGGGGAT TGTCCTGATG CACGAGGGGC AACGACGCAT CCCGGTACAG TACGCCAAGC GCGTGCGTGG CAATCGCGTG TATGGCGGGC AGAGCAGCCA TATCCCGCTG AAGGTCAACA TGGCAGGTAT GATCCCGCTG ATCTTCGCGC AGAGCATCAT CATCTTTCCG GGCACGATTG CATCGTATGC CTGCCCGGAA CAGATTGCGC CGCCGGGATC AGGCGTCTTC AAGCAGATTG CGTGCTTTAC GTATCAAACG TTTAGCCCGC AGTACGGCAG CGGGACGCTG GTGTACTCGA TTGCGCTGTT TGTGCTCGTC TATTTCTTTA CCTACTTTTA CACAAAGGTC ATTTTTGACC AGCAAAACAT CCCGGAGACG CTTCAGCGCA ACGGCGGGTT TATTCCGGGC ATTCGACCGG GGAAACGCAC CGAGGAGTAT CTCGACCAGG TGGTGAGCCG GATTACGCGA ATCGGCGCGC TGTTCCTGGG TATTGTCGCA ATTCTGCCCT TTATCACGCA GCAACTTACC GGTGTGCCAA TCGGGCTGGG CGCCACGGCG CTGCTGATCG TGGTCGGTGT GGCAGTCGAC ACGATGCGAC AGTTGGAAGC TCAACTGGTC ATGCGCAATT ATGAAGGGTT CATCAATCGC TGA
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Protein sequence | MLESVVNALR LPDLRQRILF TLAMLLLFRL IAHIPVPNID PTALESLRIA LQGNQLAQLL NIFAGGALQN LSVAAMGVYP YITAQIILQL LVPLIPALEE LRKEGEQGRM RLNRLTFYLT IPMALLQAYG QTLTLERSLG TGQALFQTPF DIVNNFFPTF TILVSMLAGT MLLVWLGEQI QERGIGNGVS MIIFAGIVAG LPGLIIQAFT TVELGGVEQI IGLVSFLVIA LGTIVGIVLM HEGQRRIPVQ YAKRVRGNRV YGGQSSHIPL KVNMAGMIPL IFAQSIIIFP GTIASYACPE QIAPPGSGVF KQIACFTYQT FSPQYGSGTL VYSIALFVLV YFFTYFYTKV IFDQQNIPET LQRNGGFIPG IRPGKRTEEY LDQVVSRITR IGALFLGIVA ILPFITQQLT GVPIGLGATA LLIVVGVAVD TMRQLEAQLV MRNYEGFINR
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