Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1155 |
Symbol | rplM |
ID | 5208106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1439224 |
End bp | 1439664 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640594772 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001275512 |
Protein GI | 148655307 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.291819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.013183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCT ACGCGCAAAA GGCGTCGGAA GTGCAGCGCG AGTGGTATGT GATCGACGCG ACGAATCAGA CTCTCGGTCG GCTCGCAACG CAGATCGCAA CCCTGCTGCG CGGCAAGCAC AAACCGACGT TTAGCCCGTA TATCGATGGC GGCGACTTCG TGATCGTCGT CAATGCCGAA CGTATCCGGC TGACCGGCAG GAAGCCGGAA CAGAAAATGT ATTACCGCCA CTCGAACTAC CCCGGCGGGT TCAAGGCGGT ATCGTTCAAA CAGTTGATGG CAAAGCATCC GGAGCGTGTG CTGCGCTTCG CCGTGAAAGG TATGCTGCCC AAAACTCGCC TGGGACGTCA ACAGTTGACG AAACTGAAGA TTTACGCCGG ACCGAAACAT CCACACGCGG CACAGCAACC GAAAGTCTAC GAACCGCGAC CTCGCGGCTA G
|
Protein sequence | MKTYAQKASE VQREWYVIDA TNQTLGRLAT QIATLLRGKH KPTFSPYIDG GDFVIVVNAE RIRLTGRKPE QKMYYRHSNY PGGFKAVSFK QLMAKHPERV LRFAVKGMLP KTRLGRQQLT KLKIYAGPKH PHAAQQPKVY EPRPRG
|
| |