| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1142 |
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| Symbol | |
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| ID | 5208093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1424031 |
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| End bp | 1426316 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594759 |
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| Product | xanthine dehydrogenase |
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| Protein accession | YP_001275499 |
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| Protein GI | 148655294 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00809293 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGCACA ATGGATCGAC GTTTCGCTAT CTCGGCAAGG GTCATCGTTT GATCGAAGGG
TTGGAGAAGA TCACCGGCAA TGCAAAGTAT GCGGGTGATC TGTCGCTCCC CGGCATGTTG
CATGCGTGTC TGGTCTTGAG TCCCTACGCC CACGCCCGGA TTGTCGCTAT TGATAGGAGC
GCCGCTCAGG CTGTTCCCGG CGTCGTCGCT GTGTTGACCG CCGACGACCT GCCAACGCGC
GACCGGGCAG TCAATTCACG CCACAGCGCT GTTCTGGCAA AAGATCGTGT CCTCTGGCGC
GGTCAACCGG TTGTCGTGGT GGTTGGCGAA ACCGAGGCGG CAGCGCGCGA CGCTGCCGAT
CGCGTGGTCG TCGAGTATGA GCCGCTGCCG CCAATTGTCG ATGTGCGGAA GGCAGCCGCC
CCTGATGCAC CGGTTATCTG GCCCGAAGGG TTGCCCAAAG AAGGCGCCGA CCTGACCGCA
GCGCATGCCG CAGTAGACAA GGGTGAACAG GAAACGACCG GCGCACCTTC GAATATTCAC
GATGAAGTTC ATTTTGCGCG CGGAGATGTT GAACGCGGTT TCGCCGAAGC CGATGTCGTC
ATCGAACGGG TGTACCGCAC GCCGATGGTG CATCAGGGGT ATCTGGAGCC GCACGCGTCG
GTTGCCGAAC CCGATCCCTA CCGTGGCGGC GTGACTGTGT ATACCAGCAC GCAGGGTCAG
TTCAGCGTGC GCGACGAGGT AGCGCGTCTT CTGTCGTTGC CAAAGCACAA GGTGCGCGTC
GTTCCGATGA CGATTGGCGG CGGTTTTGGC GCCAAGTACG GTATTATCGA TCCGCTGGTT
GCGGCGGTGG CCGTCACGCT CAAACGCCCC GTCCGCATGG TGCTGACCCG TACCGAGGAT
TTTCTTTCCA CCACGCCTTC ACCTGCCGCG ATCGTGGAAC TGAAGGTCGG TGCACGCGCC
GACGGCACGC TGACGGCAAT ACAGGCGCGC GTGCTGATGG ACAACGGGGT GTTCCCCTTT
ACGCTGGGCG GAATTGTCAG TATTCTGCTC GGCGGTTACT ACAAATGCCC CAATCTGCGG
ATCGACTGCT ATGAAGTGTT GACACACAAA CCGCAGGCAG GCGCCTATCG CGCTCCTGGC
GCGCCAACTG CCACCTTTGC CATCGAATCG ACGATCGAAG ACCTGGCGCG CGCTCTCGGT
CGTGATCCGC TCACGTTCCG ATTGCAAAAC GCGGCTGAAA CTGGCGATCC TATGGGCAAC
AACGATCCCT GGCCCCATAT CGGTCTGAAA CTGGTGCTGG AACGGTTGCG CGACCATCCT
GCCTGGAAGG ATCGGCAGGT CGGACCGAAC GAAGGCGTCG GCATCGCCAT TGGCGGATGG
CCCTGCGGTA TGTCGCCTGC GGCTTCCGTC TGCCGCGTGG ATACTGACGG CACAGTGCGC
GTCCATGTCG GATCGGTTGA TATTTCCGGA GTCAACTCTT CACTCGTGCT TGTCGCCGCC
GAGATTCTCG ACATTCCCCC CGAACAGATT GAACTCATTC AGGGCGATAC CCGCAGTGGT
CCGTTTGCCG GTCCCTCCGG CGGCAGTCAG ACGACCTACA GCGTTGCGGG GGCGGTCGCA
AAGGCTGCAC GCGCTGTGCG TGAGAAGCTG TTCGAGGTTG CTGCCGATCA CTTCGAAGCC
AGCGTCGCCG ACCTCGAACT CCGCAATGGA ATGGTGAGCG TGAAGGGCTT TCCCGACAAA
GCCGTCTCGA TCGGCACACT GGCAGCAATT GCCGAAAGCA AGGCAGGCGG ACCGGGTCCG
ATCATTGCGG AAGGGAGCGC TGCGGTTTCT GAGAATGCAC CGGGCTTCGT GGCGCACCTG
GCAAAGGTTC ACGTCGATCC TGAAACCGGC CAGGTGACGC TGAAGCAGTA CGTTGCCGTT
CAGGACGTTG GCTTCGCCCT CAACCCGACA ATGGTTGCCG GGCAGATCCA TGGCGGCTCG
GTGCAGGGCA TCGGTTGGGG ACTATACGAG GCGATGATCT ATGACGAGTA CGGTCAGTTG
CTGACGGCCA GTTTCATGGA TTACAACCTG CCAGCGTTCG ATCAGGTTCC AGACATCGAG
GCGGTGTTGG TGGAAAACCC GTCGCCTCAC GGTCCATTCG GCGCACGCGG AGTCGGTGAA
CCCCCGATCA CTGCAGGCGC TGCCGCGATC GCCAACGCTA TCCGCGATGC AACCGGCGTC
CGCATGACTG AACTGCCAAT CCGGGCGGAA GCGCTCTGGC GCGCAATGCA GGAAGCACAG
GCATAA
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| Protein sequence | MSHNGSTFRY LGKGHRLIEG LEKITGNAKY AGDLSLPGML HACLVLSPYA HARIVAIDRS
AAQAVPGVVA VLTADDLPTR DRAVNSRHSA VLAKDRVLWR GQPVVVVVGE TEAAARDAAD
RVVVEYEPLP PIVDVRKAAA PDAPVIWPEG LPKEGADLTA AHAAVDKGEQ ETTGAPSNIH
DEVHFARGDV ERGFAEADVV IERVYRTPMV HQGYLEPHAS VAEPDPYRGG VTVYTSTQGQ
FSVRDEVARL LSLPKHKVRV VPMTIGGGFG AKYGIIDPLV AAVAVTLKRP VRMVLTRTED
FLSTTPSPAA IVELKVGARA DGTLTAIQAR VLMDNGVFPF TLGGIVSILL GGYYKCPNLR
IDCYEVLTHK PQAGAYRAPG APTATFAIES TIEDLARALG RDPLTFRLQN AAETGDPMGN
NDPWPHIGLK LVLERLRDHP AWKDRQVGPN EGVGIAIGGW PCGMSPAASV CRVDTDGTVR
VHVGSVDISG VNSSLVLVAA EILDIPPEQI ELIQGDTRSG PFAGPSGGSQ TTYSVAGAVA
KAARAVREKL FEVAADHFEA SVADLELRNG MVSVKGFPDK AVSIGTLAAI AESKAGGPGP
IIAEGSAAVS ENAPGFVAHL AKVHVDPETG QVTLKQYVAV QDVGFALNPT MVAGQIHGGS
VQGIGWGLYE AMIYDEYGQL LTASFMDYNL PAFDQVPDIE AVLVENPSPH GPFGARGVGE
PPITAGAAAI ANAIRDATGV RMTELPIRAE ALWRAMQEAQ A
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