Gene RoseRS_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1123 
Symbol 
ID5208070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1400037 
End bp1400993 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID640594736 
ProductLamG domain-containing protein 
Protein accessionYP_001275480 
Protein GI148655275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.156274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACT ATCGTCTCTG GTTCGTCCGC ATCCTGGCAG CGCTCTCAGG AGTCGCGTTT 
CTCGTCCTGA CCCCTGTTGC ACCCGCAGCG CCGCCGGTTC AATCAGCGCA TCCCGGCGCA
GAACCGGCAA GCGCAGGCTA CGCGCTGCAA TTCTACGGTA ACGGCGTAAG CGATATCGAC
CGGGTCAAGG TGCGGATCGA CCCTCCCACC CCCGCCGATG TCGGCGGCGA TTTCACCATC
GAGTTCTGGC TGAAAACGAC CGCAAGCGGC GGAACCTGTA CGCCGGGCGC CTCCGGCGAC
GGCTGGATCA CCGGGCGCAC GATCATCGAC CGTGATGTGT ATGGCGGCGG CGACCACGGC
GATTACGGCA TTGCGCTGGC GTCCGGGCGC ATCTGCTTCG GCGTCGCGCG GGGAACGTCC
GGGCGCACGA TCTACGGCAG CACGACTGTG GCGAACGGAC AGTGGCGGCA TATCGCCGTC
ACGCGCAACG CCAGCAGCGG GCAGATGCAG ATCTTCGTCG ATGGACAACC CGACGCCAGC
GGAACCGGCC CGACCGGCGA CATCAGTTAT CGCAACGGGC GCAGCACCGC CTACCCGAAC
AGCGACCCCT TTCTGGTCTT CGGCGCGGAG AAGCATGACG CCGGACCGGC ATACCCATCG
TACATCGGTC TGCTCGACGA TATTCGCGTC TCGAATGTGG TGCGCTACAC CGGCGCCTTC
ACCCGCCCCG CGGCGCCGCA CGCGGTGGAT GGTTCGACCG TGGCGCTGTA CCGCTTCGAT
GAAGGGAGCG GCACGACCAT CAGCGACGCG GCAGGTGGCG GCAGCCCTGG CGTGCTTCGC
TTCGGCGGCT CGCCTGCCGG TCCGGTGTAT GTGACCGATA CGCCATTTGG CAGCACACCT
CCACCTCCGC CGCCGAACCT TGAGCCACGC GCCTATTTGC CGCTGGTGGT GCGCTGA
 
Protein sequence
MRNYRLWFVR ILAALSGVAF LVLTPVAPAA PPVQSAHPGA EPASAGYALQ FYGNGVSDID 
RVKVRIDPPT PADVGGDFTI EFWLKTTASG GTCTPGASGD GWITGRTIID RDVYGGGDHG
DYGIALASGR ICFGVARGTS GRTIYGSTTV ANGQWRHIAV TRNASSGQMQ IFVDGQPDAS
GTGPTGDISY RNGRSTAYPN SDPFLVFGAE KHDAGPAYPS YIGLLDDIRV SNVVRYTGAF
TRPAAPHAVD GSTVALYRFD EGSGTTISDA AGGGSPGVLR FGGSPAGPVY VTDTPFGSTP
PPPPPNLEPR AYLPLVVR