| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1072 |
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| Symbol | |
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| ID | 5208018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1330381 |
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| End bp | 1331805 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594686 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001275431 |
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| Protein GI | 148655226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTATTC CGCCGATCAG CATGACGCCG GACGAAATCA TGGCAACACT GCGCAGGTTC
AAGGCGCACG ACATGGACTG GCAGTCTGGT CGCGTCTTTG CGTATATCTA TCAACCCCAC
GAAACAGCAG CGGCAGTGGT TAGAGACGCT TATATGCTCT ATCTCGCCGA AAACTGTCTC
GACCCGACGA TATTCCCCAG CATCGCACAA CTGGAGCGCG ACGTGGTGCG CATGATCGCC
GGTCTGCTCC AGGGCGATGA ACAGGTTGCC GGCAATGTGA CCGGCGGTGG CACGGAGAGT
ATTCTGCTGG CGGTTAAGGC TGCCCGCGAT TGGGCGCGCG CTCACCGACC CCATATCGCG
CAACCGGAAA TGGTGCTGTC GCGGACGGCA CACGCAGCAT TTCACAAAGC GGCGCACTAC
TTCGGCGTCA AACCGGTGGT CGTCGCGTTC GATCCGGCGA CATTCGAGGC GGATGTGGCA
GCAATGCGCG CGGCAATCAC CGATAACACA ATCCTGCTCG TGGCGTCGGC GCCATGCTAT
TCGCAGGGCG TTATCGATCC CGTTCCCGCA ATTGCGTCGC TGGCGCGGGA GTATGGACTC
CTCTGCCACG TCGATGCGTG TGTTGGCGGC ATCTATCTCT CCTTTTTGCG GAAACTCGGA
TATGCGGTTC CTCCCTTCGA TTTCAGCATT CCCGGCGTCA CATCCCTCTC TGTGGACATG
CACAAATACG GATATTCCGC CAAGGGCGCT TCGCTTATCC TCTACCGCGA CCGCGCCCTG
CGGCGGTATC AGATGTTTGC TTCGACCGAC ACAACCGGCT ATACCCTCAT CAACCCGACG
GTTCTCAGTT CGCGGTCGGC TGGACCGATT GCCGGTGCGT GGGCGATCCT GCACCACCTG
GGTGAAGCGG GGTACCGGGA GATCGTAGCG ACGGTGCAGG CGGCGACAGA GCGGTTGATC
GCCGGCATCA ACGCGATTGA CGGGTTGTTT GTGCTGGGGC AGCCAGCCAT GAGCATGTTT
TCCTTCGCCT CGAACAACAT CAATGTGTTT CATCTGGCTG ATGCGTTGCG TCGGCGCGGG
TGGTATCTTC AGCCGCAGTT TTCGACGCCG CTTTCGCCGC GCAATCTGCA CGTCTCCGTC
ACGTATGGCG TTGCACACAA CGTCGAGGCG CTGCTCGCCG ATCTCGCCGC CTGCGTGGAA
GAGGTGCGCC AGGCGCCGCC AACCGATCCG ACGCTCATCC AGACACTTGT TTCTGCAATT
GCGCGCGATC CATCTCCAGC AACGATCATG GAACTGATGG CGGCAATCGG TTTGCGACCG
GGCGCCTTGC CGCAGGAGAT GGCGCTGATC AACGATGTCC TCGATGCGTT GCCGGATGCC
GTAGCAAATG AGATTGTGAT CGACTTTTTC AACAATCTGT ACTGA
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| Protein sequence | MTIPPISMTP DEIMATLRRF KAHDMDWQSG RVFAYIYQPH ETAAAVVRDA YMLYLAENCL
DPTIFPSIAQ LERDVVRMIA GLLQGDEQVA GNVTGGGTES ILLAVKAARD WARAHRPHIA
QPEMVLSRTA HAAFHKAAHY FGVKPVVVAF DPATFEADVA AMRAAITDNT ILLVASAPCY
SQGVIDPVPA IASLAREYGL LCHVDACVGG IYLSFLRKLG YAVPPFDFSI PGVTSLSVDM
HKYGYSAKGA SLILYRDRAL RRYQMFASTD TTGYTLINPT VLSSRSAGPI AGAWAILHHL
GEAGYREIVA TVQAATERLI AGINAIDGLF VLGQPAMSMF SFASNNINVF HLADALRRRG
WYLQPQFSTP LSPRNLHVSV TYGVAHNVEA LLADLAACVE EVRQAPPTDP TLIQTLVSAI
ARDPSPATIM ELMAAIGLRP GALPQEMALI NDVLDALPDA VANEIVIDFF NNLY
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