Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1038 |
Symbol | pheT |
ID | 5207984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1276054 |
End bp | 1278561 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640594652 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001275397 |
Protein GI | 148655192 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTC CATTGTCATG GCTGAAAGAG TTCGTCGATA TTACCCTGCC GGTAGAAGAA CTCGCCGAAC GCCTGACCCG CGCAGGGTTG GAGTGTGAGG GGATCGAACG GATCGGCGTC GAGGGCGCCG ATCTGCCGTG GGACCCGGAG AGAATCGTCA TCGGCAGGAT TCTCGAAGTC CGGCAGCATC CAAATGCGGA TCGGCTTGTG CTGGCCGATG TCGATTATGG CGCCGATGCC CCGCATACGG TTGTCACCGG AGCGCCCAAT CTGTTCCCTT ACAAAGACAA GGGGCGATTG TCGCAACCGC TGAAGGGCGT ATTCGCGCGC GAAGGCGCTG AACTGTACGA CGGTCACGCC GAAGGGTGGG TGAAAACGCG ACTGAAAGGT CGTCCGGTGC GTGGCATTAT GTCCGACGCC ATGCTCTGTT CAGAGAAAGA GTTAGGGCTT TCCGAAGATC ACGAAGGTAT TCTGATCCTG CCGGACGATG CGCCGGTCGG TATGCCGTTG CGCGATTATC TCGGCGATGT GGTGCTGAAG TTCGATGTCC TGCCGAACAT GGCGCGTTGT CTGTCGATTG TCGGCGTGGC GCGCGAGGTG GCTGCGCTGA CCGGCGTGCC CTTACGGATG CCGGAGATGC ACGTCGTCGA GGATGGTCCT CCCATCGAGG GGCGCGTCCG GGTGACGATC GAAGAACCTG ACCTCTGCCC GCGTTTTACA GCGACCCTGA TCGAGGGGGT CACCATCGGA CCATCGCCGC TCTGGATGCA GCGCCGCCTG ACGATGGCTG GCATGCGCCC GATCAACAAC ATTGTGGACA TCAGCAACTA TGTGATGCTC GAACTCGGCG GTCCGAACCA TATGTTCGAC GCGGATCGCG TGGCGGAACA GCACCTGATC ATTCGCCTGG CGCGCCCCGG CGAGCGTCTG GTCACGCTCG ACGGCAAGGA GCATAACCTG GATGCTTCAG TTGGCGGCGG AATGCTGCCG TTGCTGGTGT GTGACCCGCA GGGACCCCTG AGTCTGGCGG GTGTGATGGG CGGCGCATCG AGCGAAGTCA GTTCAACAAC GACCCGTATA TTGCTGGAAG TCGCGGTGTG GGATCCGACG ATCATCCGGC GGATGGGGAC TGCGTTGCGG GCGCGTTCAG AGGCGTCGAA ACGGTTCGAG CGCGGTGTGG ATTACGAATT GCCGCCGCTG GTGCAGCGTC GTGCGCTCTC GTTGCTGCAA CGAATTGCTG GCGGCAGAGT AGCGCAGGGC ATGGTGGACA ACTATCCGCG TCCGTGGAAA CCGGTGGTTC TCGACCTGAC GCCGCGCGAG GTGCGCCGCA TCGTTGGCGT CTCGCTCAGC GCCGCCGAGA TCGCCGACCT GCTGCGACCG CTGGGGTTCG CCTGCGATCT GATCGACGAT GGTGCGGCAG TGCGGGTGAC CGCACCAGGT TTCCGGCGTG ATGTCACGAT GCTTGCCGAC CTCTGCGAGG AGGTGGCGCG CATGTACGGG TACGACCGTA TTCCGCTCAC GCTGATGGCG GATGTGCTCC CTGAGCAGCG CAACAACCCA TCGCTCGAAC TGGAACTGCG TGTGCGTGAT CTGCTGGCCG GGGCAGGGCT GGATGAGGCA ATGACCTATT CGCTGACCAG TATGGCGGCA GTCGCAAAGA TCAATCCAGC TGATGCCGAT GCGTCGCTCT ATCTGCGTCT GGCGAACCCA TTGACGCCGG AGCGCGAATA TCTGCGCCGG TCGCTGCTGC CGACGCTTCT GGAGGCGCTG GCGCAGAATC TGCGGGAACG CGAACGGACG TTGCTGTTCG AGATCGGGCG CGTGTACCTG AAGCGCGCAC CCGGAAGCGG CGAAGTGCGA CCGGAAGAAC CGCGTCGTCT GGCGCTGGCG CTGGCGGGAA GGCGCTATGA ACGTTCGTGG CATACGCCCG ACGAGACGGT GATGGATTTC TTCGATCTGA AGGGGATTGT CGAGATGCTC CTGGCGCGCC TGAACATTGC CGATGTCCGC TTCGTGGCGT TGACCGACGA TCCACGGTTT CATCCGGGGC GCGCGGCGCG GCTCGAACGC GATGGGCGTG TGATCGGCGT CATTGGCGAA GTGCACCCCG ATGTTTGTGA GCGCCTGGAG ATCGCCGCGC CGCGCGCGAT GGCGGCTGAA CTCGATCTGG ACCTGATCGG CGAACTGGTC GAACCGGTGC GCTACCGCGC AATCTCACGC TATCCCGCCA CAACCAACGA TCTCGCGCTG GTGACATCGG TCGGTGTGCC AGCGGAACAG GTCACTCGCA CGATTCGCAA ATATGCTGGC GCGCTGCTTG AGTCGCTCAC ACTCTTCGAT GTGTATACAG GTGAGCAGGT AGGGGCAGGT AAACGCAGCC TCGCCTATCG CCTGGTATTC CGCGCTCCTG ACCGCACCCT GAATGATGCT GAGGTTGCCC GGATCCGGCA GAAAATCGTG CGTGGTCTGG AACACGACCT CGACGCCACG ATTCGGGGGG AGGGTTGA
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Protein sequence | MRVPLSWLKE FVDITLPVEE LAERLTRAGL ECEGIERIGV EGADLPWDPE RIVIGRILEV RQHPNADRLV LADVDYGADA PHTVVTGAPN LFPYKDKGRL SQPLKGVFAR EGAELYDGHA EGWVKTRLKG RPVRGIMSDA MLCSEKELGL SEDHEGILIL PDDAPVGMPL RDYLGDVVLK FDVLPNMARC LSIVGVAREV AALTGVPLRM PEMHVVEDGP PIEGRVRVTI EEPDLCPRFT ATLIEGVTIG PSPLWMQRRL TMAGMRPINN IVDISNYVML ELGGPNHMFD ADRVAEQHLI IRLARPGERL VTLDGKEHNL DASVGGGMLP LLVCDPQGPL SLAGVMGGAS SEVSSTTTRI LLEVAVWDPT IIRRMGTALR ARSEASKRFE RGVDYELPPL VQRRALSLLQ RIAGGRVAQG MVDNYPRPWK PVVLDLTPRE VRRIVGVSLS AAEIADLLRP LGFACDLIDD GAAVRVTAPG FRRDVTMLAD LCEEVARMYG YDRIPLTLMA DVLPEQRNNP SLELELRVRD LLAGAGLDEA MTYSLTSMAA VAKINPADAD ASLYLRLANP LTPEREYLRR SLLPTLLEAL AQNLRERERT LLFEIGRVYL KRAPGSGEVR PEEPRRLALA LAGRRYERSW HTPDETVMDF FDLKGIVEML LARLNIADVR FVALTDDPRF HPGRAARLER DGRVIGVIGE VHPDVCERLE IAAPRAMAAE LDLDLIGELV EPVRYRAISR YPATTNDLAL VTSVGVPAEQ VTRTIRKYAG ALLESLTLFD VYTGEQVGAG KRSLAYRLVF RAPDRTLNDA EVARIRQKIV RGLEHDLDAT IRGEG
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