| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0943 |
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| Symbol | |
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| ID | 5207889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1163302 |
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| End bp | 1164789 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594557 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001275302 |
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| Protein GI | 148655097 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.988075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG TTATCGTCAT TGGGGCCGGT TTTGGCGGCC TTGCAGCCGC CGTGCGCCTG
GCAGCGCGCG GCCACGACGT GCACATTTTC GAGAAGCAGG ATAAGCCGGG CGGTAAGGCG
TATGTTCTGG AGGTGGACGG CTTCCGCTTC GATACCGGTC CGACGGTCAT CACGGCGCCG
TTCATGTTTG ATGACCTGTG GCGAGCGGCG GGTCGTCGGC GCGAGGAGTA TGTCGAATTC
CGCCCGTGCC ACCCGTTCTA CCGCATCTAT GACCATACCG GTCGTCGGTT CGATCACAGC
GCCGATGAAG CGGCAGTACT GCGCGAGATT GAACGCATCA ACCCCGCCGA TGTCGAGGGG
TATCGGCGTT TTCTGGCGAG CACGCGCTCC ATCTTCGAGA AAGGATTCGT TGAACTTGCG
GACAAGCCAT TCCTGCACTT CCGCGATATG CTGCGCGTGA CGCCCGATCT CATCCGCCTG
CGATCATTCG AGAGCGTCTA CCGCTATGTG TCGCGCTATA TCAAGGACGA CTTTCTGCGG
CGCTGTTTTT CGTTCCATCC GCTGTTCATC GGCGGCAACC CGTTCTATGC TTCGTCGATC
TACTCTATGG TGCATTACCT GGAGCGTGAA TGGGGGGTGT ACTACGCCGT CGGCGGCACC
GGCGCAATCG TGGATGCTCT GGTGCGCCTC CTGCGTGAAC TCGGCGTTGC CATCCATCTC
AACGCTGAGG TGCGCGAGCT GATCGTCGAA GGGCGTCGCA TCCGCAGTGT GGCGCTTGCC
GACGGCAGCG AGTATCGCGC CGATATTGTT GTGTCGAATG CCGATGTCGC CCATACCTAC
GCCGACCTGA TCGCGCCACG CTACCGCCGT CGCTATACCG ACCGTCGCCT GCGCTCGTTG
AAGTACAGTA TGTCACTGGT TGTGATCTAT CTTGGAACAC GGCGCACCTA CCACGATGCT
CCACTGGTGC GTCACAATAT CATCTTTGGT CCACGTTACC GTGAACTGCT TGATGATATT
TTCATCCACA AACGTGTTGC AGAAGATTTC TCGCTTTACC TGCACATGCC GTCGCGCGAT
GAGCCGGATG TGGCGCCGCC CGGTTGTGAT GCATTCTACG TCCTGTCGCC GGTGCCCAAC
CTGGCGTCGC AGGCGGATTG GGCGTCGCTG GCGCGTCCAT ATCGTGATGC CATCATCGCA
TTCCTGGAGG AGCGTTTTCT CCCCGATTTG AGCAAGAACA TCGTCGTGGA GCGTATAGCC
GACCCGCGCT ACTTTCAGCG GCGTCAGAAC AACTACTTTG GCGCGGCGTT CGCGTTCGAG
CCGACGTTGC TGCAATCCGC CTGGTTCCGC CCGCATAATC GCTCTGAAGA GTTCGACAAC
CTGTACTTCG TGGGCGCCGG AACCCACCCT GGCGCAGGAT TGCCAGGCGT GTTATCATCG
GCGCTGATCG TCGAGCGTCT GGTGCAGCAA GAGTGTGTCG GGAGGTGA
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| Protein sequence | MSTVIVIGAG FGGLAAAVRL AARGHDVHIF EKQDKPGGKA YVLEVDGFRF DTGPTVITAP
FMFDDLWRAA GRRREEYVEF RPCHPFYRIY DHTGRRFDHS ADEAAVLREI ERINPADVEG
YRRFLASTRS IFEKGFVELA DKPFLHFRDM LRVTPDLIRL RSFESVYRYV SRYIKDDFLR
RCFSFHPLFI GGNPFYASSI YSMVHYLERE WGVYYAVGGT GAIVDALVRL LRELGVAIHL
NAEVRELIVE GRRIRSVALA DGSEYRADIV VSNADVAHTY ADLIAPRYRR RYTDRRLRSL
KYSMSLVVIY LGTRRTYHDA PLVRHNIIFG PRYRELLDDI FIHKRVAEDF SLYLHMPSRD
EPDVAPPGCD AFYVLSPVPN LASQADWASL ARPYRDAIIA FLEERFLPDL SKNIVVERIA
DPRYFQRRQN NYFGAAFAFE PTLLQSAWFR PHNRSEEFDN LYFVGAGTHP GAGLPGVLSS
ALIVERLVQQ ECVGR
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