Gene RoseRS_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0925 
Symbol 
ID5207871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1141137 
End bp1142099 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640594539 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_001275284 
Protein GI148655079 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.94053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.84974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCC GTGAGTCGCT CTTTATCGGC ATTGATGTCT CCAAACAGAC GCTGGATGTG 
GCGTTTGGCG CCGACCCGCA CGCGCCACTC GAGACGATAC CGTATACCGA CGAAGGTGTC
CAGCTCCTGG TCACGCGACT CCAGCGCCTG CAGCCGACCC TGATTGTGCT GGAGGCGACC
GGCGGGCTGG AGCGCATGGT GTTCGCCCAA CTGCTCCAGG CTGGCTTGCC GACGGCGCGG
GTGCAGCCAC GCCGCGTGCG CGCCCTGGCG CACGCGGAAG GACGCCAGGC GAAGACCGAC
CGCCTGGATG CCCGGTTGCT CGCCCGCTTT GCCGAACGGG TGCGCCCGCC GCACCACCAA
GCGACGGACG AGCAGCGCGC ATCCTTGCGC GACCTGCTGG TCCGGCGGGA GCAGGTGATT
CCGATGCGGA CGGCTGAGAT CAATCGGTTG ACGGCTGCCG CGCCGAACCT CCGCCCGGGC
ATCCAGAAGC ATATTGATTG GCTGGATCAG GAGATCCGTG CGCTTGAGCA GGAACGCGAC
AACGAGGCGG AGCGCACCGA CGAGGTGCGC CGGAAACGGG AGCTGCGCGA CAGCGTGCCC
GGCATCGGCG CGATCACCGC ACGGAACCTG CTGCTCCGCC TGCCCGAACT GGGGACCATC
AATCGCACGG AAGCGGCGGC CTTTGTGGGC GTTGCGCCGT ATGCCAATCA GAGCGGCGCA
CAGCACAAAC CCCGGCATAT CTCCGGCGGC AGGAGGGATG TGCGCAGCGT GTTGTACATG
GCGACCCTGG CGGCCACGCG GCGCCGTCTG GTCAGGCGCG CCTTCGATCA GCGCCTGTGT
CAAGCTGGCA AGCCGCGCAA GGTCGCCATC GTCGCTGCGA TGCGCAAGCT GCTGACTATT
CTCGGCGCAA TATTGCGTCA GCAAAAGCCC TGGGATCCGG CTGTGCATAC GAGCGCCCCT
TGA
 
Protein sequence
MASRESLFIG IDVSKQTLDV AFGADPHAPL ETIPYTDEGV QLLVTRLQRL QPTLIVLEAT 
GGLERMVFAQ LLQAGLPTAR VQPRRVRALA HAEGRQAKTD RLDARLLARF AERVRPPHHQ
ATDEQRASLR DLLVRREQVI PMRTAEINRL TAAAPNLRPG IQKHIDWLDQ EIRALEQERD
NEAERTDEVR RKRELRDSVP GIGAITARNL LLRLPELGTI NRTEAAAFVG VAPYANQSGA
QHKPRHISGG RRDVRSVLYM ATLAATRRRL VRRAFDQRLC QAGKPRKVAI VAAMRKLLTI
LGAILRQQKP WDPAVHTSAP