Gene RoseRS_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0893 
Symbol 
ID5207839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1108788 
End bp1109885 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content68% 
IMG OID640594508 
Producthypothetical protein 
Protein accessionYP_001275253 
Protein GI148655048 
COG category[L] Replication, recombination and repair 
COG ID[COG3677] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.720634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000129544 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACCCCA CCCAGGTATG TTGCCCCAAT GAGGCCTGCC CGGCAAGAGG ACAGGGAGGG 
AAAGGGAACA TCACGGTGCA CCGCCGGAAG GAAGCCCGCT ATCGATGCAC GGTTTGTGAG
AAGACCTTCA GCGCCCGTCG GGGGACGATG TGTTCCTGGA AGAAGACACC GGTGGACATG
ATCGTGCTGG TCGTCACCCT GCTGGCCCAC GGCTGTCCGG TGCGTGCGAT GGTGGCTGCC
TTTGGCGTGA AAGCGGAGAC GGTGCGCACG TGGGCGGCGG AGGCTGGTGT GCATTGTGAG
CAGGTGCATC GTCATCTGGT CCTGGGGGCT TGCTTGTCCT TGCTGCACGT GCAAGCGGAC
GAGATGCGCG TCCGCATGCA GAAGGGGATG GTGTGGATGG CGATGGCGCT GATGGTGAGC
ACCCGGCTGT GGTTGGGTGG TGTGGTCAGC GCCCATCGGG ACAAGGGCCT CATGCGCCAG
CTTGCCGACA GGGTGCGGGC CTGCGCCCGG CCGGGGGCGC TGCTGGTGGC CGTGGACGGA
CTGGCAGCCT CTGTCAATGC CTTCCGCTGC GCCGTGCGTA GCAAGGCGCC CAGGAAGGGC
CCCGGACGCC CGCACCTGGC GCCCTGGGAA CAGGTCGTCA TCGGCCAGGT GGTCACGCAG
GACGAGCGCG GTCGCATGGT GGGCGGTGTG CGCCGCCTGG TGCCGGGCGC CGCAGCGGCC
CTGGATGCGC TGTTGGCCTC GTCGGGCGGG GGTCAGACCG TGCACACCGC CTCCATCGAG
CGCCTGCATG CCACCTTCCG CTCCCGCCTG GCCAGCCTGG TGCGGCGTAC CCGCTCTGGC
GCCCGGCGCC AACGCATGGT GACCCTGGGC ATGGACCTGG TCGGCACGGT GGACAACGTC
TGTACGCCCC ACGCCACCCT GACCAACGCC CAGGGCCATC GCTGCACACC GGCCATGGCC
GCCGGCCTCA CCCACCACGT CTGGACGGTT GCGGAATTGC TTCACTTTCA TGTGCCGCCT
CCACGCTGGC AGCCTCCCAA AAAACGAGGA CGGCGCTCCA ACGAGCTGCA AACGTTGATT
GAACAATGGG CCTCATGA
 
Protein sequence
MDPTQVCCPN EACPARGQGG KGNITVHRRK EARYRCTVCE KTFSARRGTM CSWKKTPVDM 
IVLVVTLLAH GCPVRAMVAA FGVKAETVRT WAAEAGVHCE QVHRHLVLGA CLSLLHVQAD
EMRVRMQKGM VWMAMALMVS TRLWLGGVVS AHRDKGLMRQ LADRVRACAR PGALLVAVDG
LAASVNAFRC AVRSKAPRKG PGRPHLAPWE QVVIGQVVTQ DERGRMVGGV RRLVPGAAAA
LDALLASSGG GQTVHTASIE RLHATFRSRL ASLVRRTRSG ARRQRMVTLG MDLVGTVDNV
CTPHATLTNA QGHRCTPAMA AGLTHHVWTV AELLHFHVPP PRWQPPKKRG RRSNELQTLI
EQWAS