Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0893 |
Symbol | |
ID | 5207839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1108788 |
End bp | 1109885 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640594508 |
Product | hypothetical protein |
Protein accession | YP_001275253 |
Protein GI | 148655048 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.720634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000129544 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGACCCCA CCCAGGTATG TTGCCCCAAT GAGGCCTGCC CGGCAAGAGG ACAGGGAGGG AAAGGGAACA TCACGGTGCA CCGCCGGAAG GAAGCCCGCT ATCGATGCAC GGTTTGTGAG AAGACCTTCA GCGCCCGTCG GGGGACGATG TGTTCCTGGA AGAAGACACC GGTGGACATG ATCGTGCTGG TCGTCACCCT GCTGGCCCAC GGCTGTCCGG TGCGTGCGAT GGTGGCTGCC TTTGGCGTGA AAGCGGAGAC GGTGCGCACG TGGGCGGCGG AGGCTGGTGT GCATTGTGAG CAGGTGCATC GTCATCTGGT CCTGGGGGCT TGCTTGTCCT TGCTGCACGT GCAAGCGGAC GAGATGCGCG TCCGCATGCA GAAGGGGATG GTGTGGATGG CGATGGCGCT GATGGTGAGC ACCCGGCTGT GGTTGGGTGG TGTGGTCAGC GCCCATCGGG ACAAGGGCCT CATGCGCCAG CTTGCCGACA GGGTGCGGGC CTGCGCCCGG CCGGGGGCGC TGCTGGTGGC CGTGGACGGA CTGGCAGCCT CTGTCAATGC CTTCCGCTGC GCCGTGCGTA GCAAGGCGCC CAGGAAGGGC CCCGGACGCC CGCACCTGGC GCCCTGGGAA CAGGTCGTCA TCGGCCAGGT GGTCACGCAG GACGAGCGCG GTCGCATGGT GGGCGGTGTG CGCCGCCTGG TGCCGGGCGC CGCAGCGGCC CTGGATGCGC TGTTGGCCTC GTCGGGCGGG GGTCAGACCG TGCACACCGC CTCCATCGAG CGCCTGCATG CCACCTTCCG CTCCCGCCTG GCCAGCCTGG TGCGGCGTAC CCGCTCTGGC GCCCGGCGCC AACGCATGGT GACCCTGGGC ATGGACCTGG TCGGCACGGT GGACAACGTC TGTACGCCCC ACGCCACCCT GACCAACGCC CAGGGCCATC GCTGCACACC GGCCATGGCC GCCGGCCTCA CCCACCACGT CTGGACGGTT GCGGAATTGC TTCACTTTCA TGTGCCGCCT CCACGCTGGC AGCCTCCCAA AAAACGAGGA CGGCGCTCCA ACGAGCTGCA AACGTTGATT GAACAATGGG CCTCATGA
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Protein sequence | MDPTQVCCPN EACPARGQGG KGNITVHRRK EARYRCTVCE KTFSARRGTM CSWKKTPVDM IVLVVTLLAH GCPVRAMVAA FGVKAETVRT WAAEAGVHCE QVHRHLVLGA CLSLLHVQAD EMRVRMQKGM VWMAMALMVS TRLWLGGVVS AHRDKGLMRQ LADRVRACAR PGALLVAVDG LAASVNAFRC AVRSKAPRKG PGRPHLAPWE QVVIGQVVTQ DERGRMVGGV RRLVPGAAAA LDALLASSGG GQTVHTASIE RLHATFRSRL ASLVRRTRSG ARRQRMVTLG MDLVGTVDNV CTPHATLTNA QGHRCTPAMA AGLTHHVWTV AELLHFHVPP PRWQPPKKRG RRSNELQTLI EQWAS
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