Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0865 |
Symbol | |
ID | 5207811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1080055 |
End bp | 1081389 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594483 |
Product | virulence factor MVIN family protein |
Protein accession | YP_001275228 |
Protein GI | 148655023 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.156001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC GCGAATTCAC CATCGCCGAA GGGACAATCC TTTTCATATC CGCCTATGTT CTATCAGCGG GATTGGGGAT TATCCGTCAG GCGCTGTTCA ACGCCGAATT CGGCACAGGA ATGGAAGCGA GCGCCTACTA CGCCGCCTTC CGCCTGCCCG ACACCATTGC CAGCCTGATC AGCGGCGGGG CGCTTTCCAA CGCGATGATA CCGGTGTTGC TCGGCGTGCG CCACGAAGAA GGCGACACTG CCGAGCGACG TCTGGTGAAC CTGGCGGCAA CGACACTGAC TGCCGCCGTA ACGCTGATCG TGCTGATCTG CATCGTGTTT GCCCCCTTCC TTGTGCGTTT CGTCATTGCT CCAGGTTTCG ATAGCGCCAC GGCTGCATTG ACCGTGGCGC TGACACGGAT CATGCTGGCG CAACTGATCC TGGTTGTCAT CTCCAGTGTG GCGATAGCAG TATTGAACGC GCGTAACCAG TTTCTGCTCA CTGCGATCTC AATTGTGACC CACAACATCA CCATGATTGG CGGCATTCTG GCGGCGCGTT TCATTCCCGG CGTCGGCATC TATGGTCCGA CCTGCGGCGT GGTTGGCGAT GCGCTGTTGC AACTGGTCAT TCTCTGGATC GGGTTGCGCG CCAACCGATT TCGTTTGCGA CCGGTGTGGG ATCTACGCGA CGCGCAATTG CGTCGGATGC TTCGCCTGCT GACGCCGAAT GGATTGTCGT CCGGGGTGAA TTATGCCGGC GGAATCGTCG ATACTGCGTT CGCCTCGCTG GCGCGTGAGC CGGGAGCGCT ACCAACACTC TTCAACGCTG GCCTGCTGAT GGGTGTGCCA CTACGGTTGA TCGGAGTCGC TCTGGCGCAG GCGGCATTTC CACGCATCGC TGCCAGCGCG GCGCGCGGCG ACTGGGCGCG TATGCGTAAA ACTCTTGGCG CTGCACTGGC AATCAGTATC ATTCTGGCAA TCGGAGCAGC GCTGATGCTG GCACTGACCG GTCGTTCGCT CATTCGCCTG CTGTTCGAAC GTGGTCGTTT CGATGCCGCT GCGGGCGATC TGACGTCGTT GCTGCTGATT GTCTATATCG CAGGTTTGCC GGCGTATGTT GCAACCGAAG TGCTGACACG CGGGTTGATC GCTCTGCACG ATACGCAGAC GCCGTTGGTG ACCAACTGCG CGCAACTGAT GGGGCGGATA GCGCTGATCT GGATGTGGCT CGAACCGTGG GGCGTTGTGG CGATTCCGGC TGCCTTTGCG CTTACGTCGG CGCTGGAGAC ACTGACGCTG GGGATGGCGT TGCGATGGCG GATGCGGGCG AACGTTGAAG GTTGA
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Protein sequence | MIRREFTIAE GTILFISAYV LSAGLGIIRQ ALFNAEFGTG MEASAYYAAF RLPDTIASLI SGGALSNAMI PVLLGVRHEE GDTAERRLVN LAATTLTAAV TLIVLICIVF APFLVRFVIA PGFDSATAAL TVALTRIMLA QLILVVISSV AIAVLNARNQ FLLTAISIVT HNITMIGGIL AARFIPGVGI YGPTCGVVGD ALLQLVILWI GLRANRFRLR PVWDLRDAQL RRMLRLLTPN GLSSGVNYAG GIVDTAFASL AREPGALPTL FNAGLLMGVP LRLIGVALAQ AAFPRIAASA ARGDWARMRK TLGAALAISI ILAIGAALML ALTGRSLIRL LFERGRFDAA AGDLTSLLLI VYIAGLPAYV ATEVLTRGLI ALHDTQTPLV TNCAQLMGRI ALIWMWLEPW GVVAIPAAFA LTSALETLTL GMALRWRMRA NVEG
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