| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0856 |
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| Symbol | |
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| ID | 5207802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1066673 |
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| End bp | 1069354 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594474 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001275219 |
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| Protein GI | 148655014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATGA CCCTGTTTCT GTTGGGTTTG CTGATCAGCG GCAGCGCAGC GATTGTTCTG
GCGCTTGTCA TCCTGCAGCA TCGTGAAGCC AACGGCGCTC TTCCCTTTGC GCTGGTGATG
ATCGCCAGCG CAATCTGGGC GTGGGGCTAT GCCCTGCAGA TCAGTGCAGT GTCTCCCGAA
CTTGCTCTGC TTGCCGTGCG GATCAGGTAC ATTGGTCTTC TTGCCGTCCC AGCGTGCTGG
CTCTGGTTTA CGCTGATCTA CACCGAAACT ATCGCGCGCC TGACGAAGAA ACAGGCGGCG
ATGCTGGCAT TCTTCCCGGT GTTGACCTTT GTGGTGAACG TCACCAATGA CTGGCACCAA
CTCTTCTACC GACGCATCAG TGTGATGCCG CCCGGTTCGT CGCTCGTTGT GACCTTTGAA
TATGGTCCCT GGTACTGGCT CAACGTTGGC TATTCCTACC TGGTTGTGCT GATTGGACTC
TGGGTGCTGA TCCGATTCTG GGGGCGGGCG CTGCGTCTTC ATCGAATGCC GATCGCTGTG
ACAGTCGGCG GGTTGTTTTT TCTGACGGCC ATCGGGTTGA TCTTCTACAT CAGTCGTCAG
TTTGCCGGTG TCTTCGACAT CACACCGCTG TTGCTGCCGG TGAATGGAAT ATTGCTCTAC
CTGGCATTGT TCCGACCCAG GCTGTTTGAT GCGCATCCCG TCGCCTATAC GCACCTGTTC
GAGCAGTTGA ACGACGGGGT GCTGGTGTTC AATATGCAGG GCAGGGTGAT CGATTGCAAT
CCGGCGGCAT ACCGCCTGCT CGGTCTGACG AATCCCGTCG GGCGACCGGT TCAGCTTGTT
CTGCAGCATA TCCCTCAGCT GGCGCAAACC GGTTCGAGCG TTCTGCTCGA AGAGCCGCTT
CGTCTGGAGT ACAACGAACA GGTGCTCGAT GTGCGCTCGA CCATCCTGCG CGACCGCCGT
GGACAGCAGA GCGGATATAT GCTGGTGGTG CGCGATGTCT CAGAGCAGTG GCGAACGCAA
CGAGCGCTTG CCGAAAGCGA AGCCATGCTG CGCGAAGAAC GCCGACTGTT CATCGGCGGA
CCGACAGTGG TCTTTCGCTG GGAAGCTCGA CGCGACTGGC CCGTCTCATA CGTCTCCCCC
AACGTTCAAG AGCAGTTTGG ATATGCGCCG GAAGATTTCA CCGCGCACAG ACTCAGCTAT
CCCTCGTTGA TCCATCCAGA GGATTATGTG CGGATCAACC GCGAAATTGT CCATTACCTG
CACCACAAGA CGACCTGGTT TCGTCAGGAG TACCGCCTGA TGCGCGCCGA TGGCGAGTAT
CGCTGGGTCG ATGATTATAC ATCTGTCGTG TACAACGATC AGGGGAAGCC GGTCTATTTC
CTCGGTTATA TCCTCGATGT CACCAACCAG AAGCGCGCCG AAGCCGAGCG TCTGGAAATG
GAACGCCAGT TTCAGCACAC CCAAAAACTG GAAAGTCTTG GCGTGCTGGC AAGCGGCGTG
GCGCACGACT TTAATAATCT GTTGACGGCC ATTCTCGGCA ACCTCGACCT TGCGCTCCTG
ACCCTTTCCC GCAACGACCC CGCCGCTCAA CCGATTCGCA ATGCGATGCT GGCAACGCGC
TACGCAGCCG GATTGACGCG CCAGTTGCTC GCGTATGCTG GCAAGGGAAA TTACCAGGTC
ACCGATGTCA ATCTGACCGA GATAGTCCAG GGTATGGCAG CAATGCTGCG GGTCTCAGTC
GGCAAACAGG CGCGCCTGGA ACTCCGCCTC GCTCCCGATC TGCCGGTCTT TCAGGCAGAT
CCATCGCACA TCCAGCAGAT CGTGCTCAAC CTCATTCTCA ACGCCGCTGA GTCGCTCCCT
TCCGGCGAAG GCACGATCAC AGTGCGCACC GATGTCCGTG ATTGTGATGA AGCGTTTTTG
AAGCGCAACC GTATCAACAA CCAGGCGCCG CCGGGTCGCT ACCTGCTGCT GGAAGTCGCC
GATACCGGAT GCGGCATGGA CGAACGTACC CAGCGGCGCA TGTTCGACCC CTTCTTCACC
ACCAAAGCAG TCGGGCGGGG GTTGGGCATG TCGGCGATCC TGGGCATCGT CCGGCGCCAC
CACGGTGCGA TCATTGTCGA TAGCGCTCCT GGTTGCGGAA CAACGATCAC TGTGCTCTTC
CCGCCGTCTC CCGTCGAGCG CGACAGCAAC GCGGATCGCG ATCAAGAATC GTTGCCTCCT
GCTCCGTCTA CGACCGTTCT GGTCGTCGAT GACGAAGCCG ACGTGCGCGA TGTGACTGCG
CGACTGCTCA CCCATCTCGG CTTTCGGGTC GTTGTGGTTG CGGACGGCGC TTCCGCGCTT
CAAGCGTTGC AGGAACAGTC TTCAGAGATT GCGTGCGTCC TGCTCGATGC GAACCTGGCG
GGTATGGATG CGCCGACCAC CCTGCGTGAA CTGCGCGCGC TTGCGCCCCA CATCCCTGTG
GTTGTGTCGA GCGGGTACAG TCAGCACGAG GTGTTGCAAC GCTTTGCGGG CCAGACGATT
GAAGGGTTTA TTCAAAAGCC ATATCAGATG TCCGAGTTAT ACGGCGTTCT CCAGCACGCA
TTGCGGCAGT TCCTGACGGT TACCGTTGCC GATCAGCCTT CAGCCGCTGA TGCAGCCCCT
GCAACGCAAG AAACGCCGGA CGCGGACTCC AGTCCGGATT GA
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| Protein sequence | MGMTLFLLGL LISGSAAIVL ALVILQHREA NGALPFALVM IASAIWAWGY ALQISAVSPE
LALLAVRIRY IGLLAVPACW LWFTLIYTET IARLTKKQAA MLAFFPVLTF VVNVTNDWHQ
LFYRRISVMP PGSSLVVTFE YGPWYWLNVG YSYLVVLIGL WVLIRFWGRA LRLHRMPIAV
TVGGLFFLTA IGLIFYISRQ FAGVFDITPL LLPVNGILLY LALFRPRLFD AHPVAYTHLF
EQLNDGVLVF NMQGRVIDCN PAAYRLLGLT NPVGRPVQLV LQHIPQLAQT GSSVLLEEPL
RLEYNEQVLD VRSTILRDRR GQQSGYMLVV RDVSEQWRTQ RALAESEAML REERRLFIGG
PTVVFRWEAR RDWPVSYVSP NVQEQFGYAP EDFTAHRLSY PSLIHPEDYV RINREIVHYL
HHKTTWFRQE YRLMRADGEY RWVDDYTSVV YNDQGKPVYF LGYILDVTNQ KRAEAERLEM
ERQFQHTQKL ESLGVLASGV AHDFNNLLTA ILGNLDLALL TLSRNDPAAQ PIRNAMLATR
YAAGLTRQLL AYAGKGNYQV TDVNLTEIVQ GMAAMLRVSV GKQARLELRL APDLPVFQAD
PSHIQQIVLN LILNAAESLP SGEGTITVRT DVRDCDEAFL KRNRINNQAP PGRYLLLEVA
DTGCGMDERT QRRMFDPFFT TKAVGRGLGM SAILGIVRRH HGAIIVDSAP GCGTTITVLF
PPSPVERDSN ADRDQESLPP APSTTVLVVD DEADVRDVTA RLLTHLGFRV VVVADGASAL
QALQEQSSEI ACVLLDANLA GMDAPTTLRE LRALAPHIPV VVSSGYSQHE VLQRFAGQTI
EGFIQKPYQM SELYGVLQHA LRQFLTVTVA DQPSAADAAP ATQETPDADS SPD
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