Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0854 |
Symbol | |
ID | 5207800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1062904 |
End bp | 1065201 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594472 |
Product | hypothetical protein |
Protein accession | YP_001275217 |
Protein GI | 148655012 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.5033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCAATC TGCGTCGCTG GCAACCAGGG TTGCCGCTGG CGATGACGGC GCTCGGCGCC CTGATCGCGC TGCTGGTTGC CTATGCCGCT CAACCGCAGG TAACGCTCGA TATTGGCGCC CGTCTTGACT ATCCCTACAT CCGTGGTATG CACGGGCGCG AGTTTACCGC ACAGACAGTC CTCATGCGGG TTGCTGCGCT CCCCGCTTCA AACGAGGTCG TTGTTGCGGC GCCGCTGCGT GACGATGCAC GCATGGTGAC GCTGACGCTG GACGACTGGC AGCCAGATGC AGTTCATCCA CGTCGTCTGA TTGCGGTCTA TGCCAATGAT CGGCGGATCG ACACCCTTGA TGATCGTGGC GGCGCCCGGC GCTTTCGCCT GCTTCTGCCC GATGACATGG ATCTGTCCGG CGGCGTGCGA TTGCGCATCG AAGCGATTCC AGACCGCACG CTCGATGTGC CGCCGGTACG CCTGATCGAT GCCGAAATCG CCAGAGCGCT GACCTATCGG TGGACGAGTG AACGCTCGAC GATTACGTTT CCTGCATTGG GACACGGCGA TTGGCGTGTG GAACTGCGGG CGCTGGTGGC GCATCCGGAT GGCGGCGCGG TCAATGCGCA CGTCTTCGCC AATGGAGAAA GGATTGCCGC TCTGCCTGAG ACGCCGGGTA TGCGCCGCTA TCTGTTGATC GCGCCAGCGC GCACCCTTAA CAACGGAAAC CTGAATCTGG ACATCACAGC GAATCCGTAC CGCGATCCAC GCCCACTGGG AGTGTCGCTG GAGCGTGTGA CAGTAACGCC GCTCACCCGT GCGCCGGCTG CGGCGCTGCC GCCGTGGAGC GCAGTGTTGC CAGCAATGAC CATTGTTGCC GGTATGTACG GCGCCCTTCG CGCAGCGCGG GTTCCGGCAT GGATTGCGTG CGGCGCGGGC ATCGTGGTGG CGCTGATCGG CGCATGGGCG CTGATGGCGT ACCGCTACCC GACCGGGCTA TTCCTGGGGC CGCTGGCATG GTTTGTGCTC TTCACCCTTG CGCTGACGCC GGTGGCGGAT CGCGGTGTGG GCTGGATCTT CCGTAAACTC GATACCCCCC TTGATCCGGC AGTGCGGTAT GCGCTGCTGG TTATCTTTCT TGTCGGTCTC TGGCTGAAAG GTGGCGGATT ACTCTTCCCC TATATGCGCG CTATCGACGT CGGCTGGCAC ATGGATCGCG TGCGCTGGAT CCTCGATGGG CACTGGGCGG AGATGTATCG CCCTGGCGCC TTCTCAGAAT CGGTGATGCC GATTAACGAG TGGGGACCGA ATCGCCCTGT CATTCCCTAT TCGCCGTTTT TTCACCTCTT TTCGACGAGT TTTGCCCTCT TACCATGGTC GCTCGAAACC AGCGCGAACC TCTTCAGCGC GCTGCTCGAT AACAGTCGCG TGTTTCTGAT CGCTCTTCTG GCGCGCAAGG CAGGGTTGAG CCATCGCGCA ACGCTTTTTG CGGCACTGAT CTACGCCGTT ACACCCGTGA CCTTCCTGCT CCATTCGTGG GGGAATGTTC CGACGACATC TGGCATGTGG TGGACGCTTG TCACCTCGAC GGTCATGGTC GCACTCTATC CGCGTCTCCA CGAACGGGGT CCGTTTGCCC TGCTCACCGT GCTGACCGTG ATCACACTCC TGTTCTACAC GGTGATGGCG GTCTTCCACA TTGTGTTCAT CGTCTGCTTC ATTGGAATCG CGCTCGTCGC ACCGGTGGGG ATCGACCGAA AACCGCTGCG CCCTGTTGCA CTCTCACTGG TCGTGGCGCT GGCAGCGGCA ACGCTGATCT ACTACGGTCA GTATATTCCA CCGATTGTCG AGCGAACCAT ACCGTATATG CTGAGTCTGG CGACAAGTGG TCCGGAGAGC GTCGGTGTGG CGCGTCCGCC GTTCAGTGAC TACCTTTTCT CTTTCTGGCG CCACTTGCGG TACGATATGC GACCGGATGG CTTTTTGTAC TACGGTTTGC TCATTCCGCT CGCATTCGTT GTTCCGGGCT TTGTTGCGTT GCGCAAGCGC CCGCTGCTGT GGGTGATGCT GGCAGCGTGG TTTTCGGTCG GAACCCTGTT CATGCTGGTG GGATATCGGG TGTCGATGGT TGACAAGCAG TTGTTCTACA TTGTGCCCGC CATCTGCCTC TGCTGGGCGA TCTACGCTGA GCGCTTCTGG CGACGCGGGT GGTGGGGGAA GGCGCTTGTT GCGACGATCT ACACCTTTAC GCTGGCGACG GCGCTCGATC TCTGGGTGAT TCGTATTCTG CGGTCGCCGG TGGTGTGA
|
Protein sequence | MINLRRWQPG LPLAMTALGA LIALLVAYAA QPQVTLDIGA RLDYPYIRGM HGREFTAQTV LMRVAALPAS NEVVVAAPLR DDARMVTLTL DDWQPDAVHP RRLIAVYAND RRIDTLDDRG GARRFRLLLP DDMDLSGGVR LRIEAIPDRT LDVPPVRLID AEIARALTYR WTSERSTITF PALGHGDWRV ELRALVAHPD GGAVNAHVFA NGERIAALPE TPGMRRYLLI APARTLNNGN LNLDITANPY RDPRPLGVSL ERVTVTPLTR APAAALPPWS AVLPAMTIVA GMYGALRAAR VPAWIACGAG IVVALIGAWA LMAYRYPTGL FLGPLAWFVL FTLALTPVAD RGVGWIFRKL DTPLDPAVRY ALLVIFLVGL WLKGGGLLFP YMRAIDVGWH MDRVRWILDG HWAEMYRPGA FSESVMPINE WGPNRPVIPY SPFFHLFSTS FALLPWSLET SANLFSALLD NSRVFLIALL ARKAGLSHRA TLFAALIYAV TPVTFLLHSW GNVPTTSGMW WTLVTSTVMV ALYPRLHERG PFALLTVLTV ITLLFYTVMA VFHIVFIVCF IGIALVAPVG IDRKPLRPVA LSLVVALAAA TLIYYGQYIP PIVERTIPYM LSLATSGPES VGVARPPFSD YLFSFWRHLR YDMRPDGFLY YGLLIPLAFV VPGFVALRKR PLLWVMLAAW FSVGTLFMLV GYRVSMVDKQ LFYIVPAICL CWAIYAERFW RRGWWGKALV ATIYTFTLAT ALDLWVIRIL RSPVV
|
| |