| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0823 |
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| Symbol | |
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| ID | 5207766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1019868 |
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| End bp | 1022900 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594439 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001275187 |
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| Protein GI | 148654982 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.449407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT TTTTCGAGAA ACTACTCGGC TTTGGTCCGG ATCGCGCAAT CAAGCAGATC
GAACCGATCG TGCGGCGGAT CAACAGCCTC GAACCATCGG TCGAGGCGCT CTCCAACGCT
GAACTGCGTG CCAAAACCGA CGAGTTCAAG CAGCGTCTCG CCGATGGCGA AACGCTTGAC
GATCTGCTTC CCGAAGCGTT TGCCGTCGTG CGGGAGGCGG CGCGCCGCAC GATTGGTCAG
CGCCACTACG ACGTGCAGTT GATAGGCGGC ATTGTGCTGC ACCAGGGCAA GATCGCCGAG
ATGAAGACCG GCGAAGGGAA AACGCTGGTG GCGACCCTGC CGCTCTATCT GAATGCGCTG
ACCGGCAGGG GATGCCATCT GGTCACGGTC AACGACTATC TGGCGAAAGT CGGAGCAGGA
TGGATGGGAC CGATCTACCA TCTGCTTGGG CTGAGCGTCG CCACAATTTC GCATGAATAT
TCGGCGATCT ACGATCCGGA TTATGTCGAT CCAAAGGCGA ACCCCGACGA TCGACGTCTG
GTTCACTGGC GTCCCTGTTC GCGGCGCGAA GCCTACCTTG CGGATATTAC CTATGGAACG
AACAACGAGT TCGGGTTCGA CTACCTGCGC GACAATATGG CGTGGGATCT TGCGCAACTG
GTGCAGCGTG AACTGCACTA TGCGATTGTC GATGAGGTGG ACAATATTCT GATCGACGAG
GCGCGCACGC CGTTGATCAT TTCCGGTCCG GCGCAGGAGA GCGGCGATGA ATATCGCCGG
TTTGCCACGC TGGTGCGCCA TCTCAAACCC AGCCCCTACA CGCCCGACCA GATCAAGAAG
CAGATGATCG AGGATCCGGA GGGCGATTTC GTCATCGAAC CGCGCTCGAA GAGTATTCAG
TTGACCGATC AGGGTGTGGC GAAGATCGAG CGATTGCTGA AGATTCCTGA AGGGGAATCG
CTCTATGACC CGAAATACTA CCGCCTGACC CACTATCTGG ACAATGCGCT GCGGGCCGAG
TTCATCTACC AGCGCGACCG GGATTACATT GTCGAACATG GCGAGGTCAT CATCGTCGAT
GAGTTCACCG GTCGCAAGAT GCCAGGGCGC CGCTGGTCCG ACGGTCTGCA CCAGGCGGTG
GAGGCGAAGG AGGGCGTGAA GCCGCGCCAG GAGAATGTTA CCCTGGCGAC GATCACGTTC
CAGAACTACT TCCGCATGTA CCAGAAACTT GCCGGTATGA CCGGTACTGC CTACACCGAA
CGTGAGGAGT TCGCCAAGAT CTACAATCTG GAAGTCGTCG TCATTCCGAC GCACCGCCCG
ATGATCCGCA AGGATTATGA TGACCAGATC TACCGGTCTG AGAAGGCGAA GTTCGAGGCG
GTGATCCGGG AGATCGAGGA AATGCACGCC ATCGGGCGAC CGGTGCTGGT CGGCACCACG
TCGGTCGAGA CTTCTGAGCG GTTGAGCGAA ATGCTGAAAC GGCGCGGCAT CAAGCATGAA
GTGCTGAACG CCAAGTACCA CGAGCGCGAA GCGCGGATCG TGGCGCAGGC GGGGCGCAAG
GGCGCAGTGA CCATTGCCAC GAATATGGCG GGGCGCGGCA CCGACATTCT GCTCGGCGGC
AACCCGGATG GTCTGATTGA AGAGATTCTT GCGCAACGCG GCATTAAGAT CGAGCAGGCG
ACGCCGGAAC AGATCCGGGC AGCGCAGGAA GAAGCACGGC GCATCACTGA AGCTGAGGGT
AAAGAGGTGC GTGAACTGGG CGGGTTGCAC ATCATCGGCA CCGAACGCCA CGAATCGCGG
CGTATCGACA ACCAGCTGCG CGGGCGCGCC GGTCGTCAGG GTGATCCCGG TTCTTCGCGC
TTCTATCTGT CGCTCGAAGA TGACCTGCTG CGGCGCTTCG GTCCGATGGA CCGTGTCAAG
GGGCTGATGG AGCGGCTCGG CGTCGATGAC AGCCTGCCGA TCGAAGCCGG GTTGATCAAT
CGTACCATCG AAAGCGCTCA AACGCGCGTT GAGGGATACA ACTTCGATAT TCGCAAACAT
ACCGTCGAGT TCGACGATGT GATGAACAAG CAACGCACGG TCATCTACGC CGACCGGCGC
AGGATTCTGG AAGGCGAGAA CATGCGCGAG CGGGTGCTCG ACATGATCGC CGATGAGGTG
CATGCCCTGG TTGAACGCTA CCTGCCAGAA ACGAAGGGGC GCGCCGACGA CTTCGAGGAG
TGGGATATCG AAGGATTGGT GCGCGCAGTG CGCACAATCG ACCCGTTGCT CGACGAAACG
AAACTGTCGC CGGAGCAGCT TGAACATCTC TCGCGCCAGG AGATCGAAGA TGCGATCATG
CAGGCAATCG AGGACGACTA CCAGGAGCGC GAGAAAGCCA TCGGCGAAGA GAACATGCGC
CTCGTCGAAC GGCGCATGAT GCTCAGCGCT ATCGACCGTC AATGGATCGA TTACCTGACC
GGCATGGAGG ATCTGCGTCA GGAGATCGGG TTGCAGGCTG TCGCGCAGCG CGATCCGCTC
ATCGAGTATC AGCGGAATGC CTACGCGATG TTCGAAGAAC TGAAAGCCAA TATCCAGCGC
GACATCGTCT ACCAGATTAT TCCGGTTTCC TTCCAGTACG AGCAGCATCT GCGCCAGGTG
GAAGCCGAGC AGCAGCGACG CCTGCTTGCT GCGCAACAGG CGGGCGCTGC CGATGGCAAT
GCAAAGGGAG CGCGGACGGT TCGCCACAGT GTGCGTCTCC CCGGTCGCAA CGAACCCTGC
CCGTGCGGGA GCGGGAAGAA GTTCAAGGTC TGCCACTGGG GTCGTGAGGA AGAACTGATC
GCTCTGCTGC AACAGCGCCA GACGGATCAG CACGCGGCGG TTGCTGCGGA TACGCCAGCG
CAACCGGCGC CACAAGCAAC GGCAACCAGA CCGCCGACGT CACAGGTTCC GCGTGGACGC
GCCGCTCCGC CACCCGCGAA CCCACAACCA CGCAGCGGCA AATCGCCTGC CCAGGCGCCG
CGCGGCAAGG GTGCATCCGC CCGAAAGAAG TGA
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| Protein sequence | MKAFFEKLLG FGPDRAIKQI EPIVRRINSL EPSVEALSNA ELRAKTDEFK QRLADGETLD
DLLPEAFAVV REAARRTIGQ RHYDVQLIGG IVLHQGKIAE MKTGEGKTLV ATLPLYLNAL
TGRGCHLVTV NDYLAKVGAG WMGPIYHLLG LSVATISHEY SAIYDPDYVD PKANPDDRRL
VHWRPCSRRE AYLADITYGT NNEFGFDYLR DNMAWDLAQL VQRELHYAIV DEVDNILIDE
ARTPLIISGP AQESGDEYRR FATLVRHLKP SPYTPDQIKK QMIEDPEGDF VIEPRSKSIQ
LTDQGVAKIE RLLKIPEGES LYDPKYYRLT HYLDNALRAE FIYQRDRDYI VEHGEVIIVD
EFTGRKMPGR RWSDGLHQAV EAKEGVKPRQ ENVTLATITF QNYFRMYQKL AGMTGTAYTE
REEFAKIYNL EVVVIPTHRP MIRKDYDDQI YRSEKAKFEA VIREIEEMHA IGRPVLVGTT
SVETSERLSE MLKRRGIKHE VLNAKYHERE ARIVAQAGRK GAVTIATNMA GRGTDILLGG
NPDGLIEEIL AQRGIKIEQA TPEQIRAAQE EARRITEAEG KEVRELGGLH IIGTERHESR
RIDNQLRGRA GRQGDPGSSR FYLSLEDDLL RRFGPMDRVK GLMERLGVDD SLPIEAGLIN
RTIESAQTRV EGYNFDIRKH TVEFDDVMNK QRTVIYADRR RILEGENMRE RVLDMIADEV
HALVERYLPE TKGRADDFEE WDIEGLVRAV RTIDPLLDET KLSPEQLEHL SRQEIEDAIM
QAIEDDYQER EKAIGEENMR LVERRMMLSA IDRQWIDYLT GMEDLRQEIG LQAVAQRDPL
IEYQRNAYAM FEELKANIQR DIVYQIIPVS FQYEQHLRQV EAEQQRRLLA AQQAGAADGN
AKGARTVRHS VRLPGRNEPC PCGSGKKFKV CHWGREEELI ALLQQRQTDQ HAAVAADTPA
QPAPQATATR PPTSQVPRGR AAPPPANPQP RSGKSPAQAP RGKGASARKK
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