Gene RoseRS_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0780 
Symbol 
ID5207720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp965178 
End bp967313 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content60% 
IMG OID640594394 
Productglycosyl transferase, group 1 
Protein accessionYP_001275145 
Protein GI148654940 
COG category[H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC TGGTTGTGCT CACCTACTAT TACCCGCATT GGACAGGATT GACCGTTCAT 
GCCGTGCGTG TGGCGGAGCA TCTGGCAGAA CGGGGGCATC GTGTGACGGT GCTTACAACC
AGGCACAGCC CTGAACTCGC ACGTGATGAG ATGATTAACG GCGTGCGCGT TGTGCGGCTC
TGGCCCCTCA CGCGCTTCAG TCGCGGCATG ATCACCCCTG CATTTCCCTG GGCTGCGGCA
CAGTTGATCG CCGAGCACGA TGTGGTGCAG ATCCATACGC CGCTCCCCGA AGCGCCGATC
GTTGCCGCCC TCTGCCGCCT GCTCGGGCGT CCGCTTCTCA TGACCCATCA CGGCGATGTC
GTGATGCCGG ATAGCCTGAC AGAGCAACTC GTCGAACGCG CTGCGTTCCA TATCCTGCGC
GCTGCCGCGT CTGCAGCCGA TGGCATCACG TCCTACAGCG AAGATTATGC CCGTCACTCG
AAGTTGCTCT GGCCCTTTCG CGATAAACTG ACCTGTATCT ACCCGCCGGT GGAATTTCCC
GAGCCGGATG CAGCTGCCGC CGCCGCCTGG AAGCGCGACC TCGGTCTCGA TGGGAAGCGA
CTCATCGGGT TTGCCGGGCG CTGGGTGAGC GAAAAGGGGT TCGACGATTT GCTGCGCGCA
TTACCGTTCA TTCGCGCTGA ACTTCCTGAA GCGCACCTGG TCTTCGCCGG TGAACGCAAC
GTTGTCTACG ATGATTTTTA TCATGTCTGC CAGCCGCTGA TCGAAGCGCA GCAGGAACAT
ATCACGTTCC TTGGTCTGAT CCGGGATCGC CGCCGTCTCG CCAATTTCTA CGCCATGCTC
GATCTGTTCG TGCTGCCCAG CCATACCGAT ATGATGGCGC TTACACAGGT TGAGGCGATG
TTGTGCGGCA CGCCGGTCGT CGCAACAGAT ATACCCGGTG CGCGCGTGGT GGTGCGCGAA
ACCGGATTCG GACGCCTGGC GCCGCCGTAC AATCCGCCAG AACTCGCCCG TACTATCGTC
GAGACGCTGC GTGACCGTGA ACGGTATCTT CCAACACCCG CCGGTGTGCG CCGCATTTTC
AATACCCGTC AGACGATTGA CGCATACGAG CAACTGCTTG AGCGGCTGGT GCGTACCCGG
AGCCGCACCA ACCTCTATGC GCGCGCGAGC CGGCGCCTGG TGCGCAGTAC GCTCCACATT
ATTGCCGCTG CACCGGTCAC TGCGACAACA ACAGCAATGC TTGCACCTGC GTTGTCACAC
CCAACTGGAG CGCCGTCCCA TGCTGCGCTC TCTGCTGATG ATCGCGCAAT GCTCGAACAC
CTGTTGCAGA ATGAGGCGGA TATGGCATAC CGCCGCCGTG CGATAACCCT GCTGGAGTAT
CTCGAACTCC GCGACGGCGA GACGGTGCTT GACTGCGGGT GCGGCATGGG GGTCTATCTG
ATGTTTATGG GGCGTTTGCG CCGTTTGAAT CTGGTAGGCG TCGATGGCGA CATCGCGCGC
CTGCGCTGGG CGGAACGCGA ACATGTGCCT GCCAGTCTCG CCGGGGTCGA TATCCATCGT
CTGCCGTTTG CCGATAACAG TTTCGATAAG GTGTTGATGT CGGAGGTGCT CGAACACCTC
GCCGATGATC GCGGCGCACT GCGCGAGGTT TTTCGCATTC TCAAACCGGG CGGCATCCTG
GCGCTCAGCG TGCCGCACGC CAACTATCCG TTCTGGTGGG ATCCGATCAA CAAGACCATC
GAAGCGCTGG GCGGGCGACC GATCCGGAGT CCAGGACCGA TCACTGGATT GTGGAGCAAT
CACTGGCGGT TGTACCGTCC CGAAACGCTC CGCGACGTGG TCTCCGGCGC CGGGTTCTCC
ATTGAGGCGC TGGAAGAACA GACCCATTAT GCGTTTCCCT TTATCCACTT TATCGTGTAC
AGTATCGGCA AACCGCTGAT TGAGAAGAAT CTCCTGCCGC GTCGCTTCCG CGACAGCGCC
GACCGGTTTC GCGGCGAGCG CAACAGCGGC AGTCTGCTCA ACCCGATCAA TCTGGGCGTG
CGGCTGTTTC GCCTGGTAGA CGCACGCAAT GACCATCTGC GCGGCGATGA GAAAACGTTC
GTCAGCATCG TTCTTAAAGC GCGGAAACCA TGCTGA
 
Protein sequence
MNILVVLTYY YPHWTGLTVH AVRVAEHLAE RGHRVTVLTT RHSPELARDE MINGVRVVRL 
WPLTRFSRGM ITPAFPWAAA QLIAEHDVVQ IHTPLPEAPI VAALCRLLGR PLLMTHHGDV
VMPDSLTEQL VERAAFHILR AAASAADGIT SYSEDYARHS KLLWPFRDKL TCIYPPVEFP
EPDAAAAAAW KRDLGLDGKR LIGFAGRWVS EKGFDDLLRA LPFIRAELPE AHLVFAGERN
VVYDDFYHVC QPLIEAQQEH ITFLGLIRDR RRLANFYAML DLFVLPSHTD MMALTQVEAM
LCGTPVVATD IPGARVVVRE TGFGRLAPPY NPPELARTIV ETLRDRERYL PTPAGVRRIF
NTRQTIDAYE QLLERLVRTR SRTNLYARAS RRLVRSTLHI IAAAPVTATT TAMLAPALSH
PTGAPSHAAL SADDRAMLEH LLQNEADMAY RRRAITLLEY LELRDGETVL DCGCGMGVYL
MFMGRLRRLN LVGVDGDIAR LRWAEREHVP ASLAGVDIHR LPFADNSFDK VLMSEVLEHL
ADDRGALREV FRILKPGGIL ALSVPHANYP FWWDPINKTI EALGGRPIRS PGPITGLWSN
HWRLYRPETL RDVVSGAGFS IEALEEQTHY AFPFIHFIVY SIGKPLIEKN LLPRRFRDSA
DRFRGERNSG SLLNPINLGV RLFRLVDARN DHLRGDEKTF VSIVLKARKP C