Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0742 |
Symbol | |
ID | 5207681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 919837 |
End bp | 920970 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640594356 |
Product | hypothetical protein |
Protein accession | YP_001275108 |
Protein GI | 148654903 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000011109 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00505908 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATGAAC CCAACAAAAT ACTCTCAGAT ATTTTAGGAT TCGCCTTAGA GCGTATAGAT CACCCATTTA TCACCGAACC TAACATTCAA TCGTTAGTTG AGAGTGTATG CCGGCAAATG AGCAATCGCG CATGCACAAG ACTTCTTATG GCTTGCATGT TAGCTAAAAT ACACCAACCA CAAGTTGACC CGCGAAAGCC ATATACCGCG ATTCGTGGTG ATGACGCTTT CTCTGGTCGT TCATATGACG AAAAATATAT TACTCGCTTC ATAATTGACA ATCGTTTACC GCTAAATACA ACGACCGCTT TTCTCACCCC TGCTTTCCGT AATTTGGATA AGCCTCTTGA GGTTGATTTG AATTTAGTAG GTAGGCCTGC TTATGTATAC AAGGCGACTC TAGAGCTGCT CGACTATACA TACCGAGGTA AAGTGTCTGC GAGCGATCTG CTATCTGAAA TAGTGCGCGT ATTACTGGTA ATTCGAAAAG AGAATCAGGA AAGGATAGAT TCTCTGCTTA GAGCTCTTAG ACCAGAAGAC ACGTTACCAT TATCATCTGA AGAAATCGTG ATCCTGATCG ATCAACATCT CAAGTGTAAA AATTCCAGTA GATTGCCGGT TTTGATCGTT GCTGCAGCTT ACAATGCAAT GGAAGAGATA ATAGGAGAAC GTATATTGCC ATTACAAAGT CATAATGCTG CCGATGAACA AACAGGATCT CTCGGAGACG TTGAGGTTTG TCTTGAAAAT GACGACCATA TAGTAACTGT GTATGAAATG AAAATGAGAC GCGTGACAAT TGATGACATT AACTTTGCTC TCGAAAAGAT CAAATCAGCT CATCACAAGA TACACAATTA TATCTTTATA ACCACTGAGA CGATTGATGA TAACATCATG GCTTTTGCAG CAGGATGCTA TGAAAGAACC GGTGGAACAG AAGTCGCTAT TCTTGATTGC ATAAGTTTTC TAAGACATTT TTTACATCTT TTTCACAGAT CACGAACCAG GTTTTTAGAT GCTTACCAAA AACTCGTACT GGAGGAACCT GAAAGTGCAG TCAGTCAGCC GCTGAAGGAA GCATTTCTGG CATTAAGGCG AGCAGCACAA GATAGAGGGG AAGATAGAGA CTAG
|
Protein sequence | MDEPNKILSD ILGFALERID HPFITEPNIQ SLVESVCRQM SNRACTRLLM ACMLAKIHQP QVDPRKPYTA IRGDDAFSGR SYDEKYITRF IIDNRLPLNT TTAFLTPAFR NLDKPLEVDL NLVGRPAYVY KATLELLDYT YRGKVSASDL LSEIVRVLLV IRKENQERID SLLRALRPED TLPLSSEEIV ILIDQHLKCK NSSRLPVLIV AAAYNAMEEI IGERILPLQS HNAADEQTGS LGDVEVCLEN DDHIVTVYEM KMRRVTIDDI NFALEKIKSA HHKIHNYIFI TTETIDDNIM AFAAGCYERT GGTEVAILDC ISFLRHFLHL FHRSRTRFLD AYQKLVLEEP ESAVSQPLKE AFLALRRAAQ DRGEDRD
|
| |