| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0725 |
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| Symbol | |
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| ID | 5207664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 892657 |
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| End bp | 894327 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594339 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001275091 |
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| Protein GI | 148654886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTC GCATCCGCTG GCAAATCCTG ATTGCGTCGA TCAGTGCTCT GACGGTGCTG
CTCCTGATGA GTTACCTGGC GCTCACACGC GCATCGGTGG CGCGCCCGCT GGCAGGAGGC
GATTATATCG AAGGGGTTGT CGGCGCGCCG GTGCATCTCA ATCCCCTGGT CGCTGATCCA
GCCTCCGATC CGGTCGCCGC CGACATCCAG CGCCTGGTCT TCGAAGGGTT GACCCGCCCC
GGTCCCGACG GTCTACCCAT GCCGGCACTC GCCGAGTCGT GGGCGGTTGA TGAGAGCGGG
ACAGTCTACA CCTTTACACT GCGAAGCGGC GCGTCGTGGC ACGATGGTGC GCCGGTGACG
GTCGATGACG TGCTGTTCAC GCTGCGCGCT GTGCAGGGTC CGGCGTTCGC CGGTGATCAG
AACGTTGCCG CTTTCTGGCG TACTGTCCTG GTTGATCGCG TCGGAGAACG CAGCGTCAGT
TTCCGCTTGG AAGCGCCATT TGCGCCATTT CTGCGGTTGA CCGGTTTCCC GATCCTCCCC
GCGCACCTGC TGCGTAACGT TCCGCCGGAA CAGTGGGAGG CGCATCCATT CAACCGCTTG
CCGGTCGGCG CCGGTCCGTA CCGCCTGGTG GAACTCGATG AACAGCGTGC GCTGCTACGC
GCCAACCCGC GTTATTTCGG CGCAACCCCG TTCATCGAAA CGATTGAACT GCGCTTTTTT
CGCACTGAAC AGGAAGCATT CGCTGCGCTG ACCCGCAGCG AGATTCAGGG TCTGGCATTC
ACCGGCGCCA GCGCCCTGGC GGATGTCAAC CTGCCACGCG GCATTGTGCG ACGTCAGGCG
CTGCTGGATG GATACACGGC GCTCTCCTTC AACCTGCGCG ACGGTCTGCT CACCGATCTC
GGCGTGCGAC GCGCACTGGC GACTGCACTC GACAAGGATG CCCTGATCGC CAGTGCGCTT
GCGGGGAAGG TGATGCGGCT CGATACGCCG ATTCTGCATG GATGGTGGGC GGAAACGTCC
GATGTGTCGT GGTATGAGCC AGACGTTGCC CGCGCAATGG CGCAACTTGA CACGCTGGGG
TACGTCCCGG GCGCCGATGG CGTCCGTGTT CGGGACGGTC AACCACTCGT CTTTTCGCTG
CTGACCGATA ACTCTCCAAC GCGGCGTGCG GTTGCAGAAG AGATTGCCCG TCAGTGGAGC
GCCATCGGGG TGCAGATCGT TATCGAACCG GTCGAACCGA CCGAAATGCA ACGCCGGCTG
GAAACGCATG AATTCACCAT CGCACTGCAC GGATGGCAGC GGCTCGGTTC CGATCCCGAT
GTCTTCGAAC TCTGGCATTC GAGTCAGGCG GAGCGCGGAC GCAATTACGC AGGTCTCGCA
GATGCCACTA TCGACGAGAT TCTCTCCAGC GCGCGCAAAA TCTACGACAT CACGGATCGT
GCCGAACTCT ACCGTGAATT TCAGGAACGC TGGGTCGAAC TGGCGCCGGG GATCATTCTC
TATCAACCGA TCCTGTTCCA CGCCACAGTT GCCGACCTCG GCGACACGAT TGCCGTCCCG
CCGGATGCCG CCGCTTCGCC CCATCTGCTG ATCGGGCGCG AGGGGCGTTT TGTGAATGTC
AACCGCTGGT ATCTGCGTAG CGCTCGCGAG ATCCGCGGTG ATTTGCGATA A
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| Protein sequence | MARRIRWQIL IASISALTVL LLMSYLALTR ASVARPLAGG DYIEGVVGAP VHLNPLVADP
ASDPVAADIQ RLVFEGLTRP GPDGLPMPAL AESWAVDESG TVYTFTLRSG ASWHDGAPVT
VDDVLFTLRA VQGPAFAGDQ NVAAFWRTVL VDRVGERSVS FRLEAPFAPF LRLTGFPILP
AHLLRNVPPE QWEAHPFNRL PVGAGPYRLV ELDEQRALLR ANPRYFGATP FIETIELRFF
RTEQEAFAAL TRSEIQGLAF TGASALADVN LPRGIVRRQA LLDGYTALSF NLRDGLLTDL
GVRRALATAL DKDALIASAL AGKVMRLDTP ILHGWWAETS DVSWYEPDVA RAMAQLDTLG
YVPGADGVRV RDGQPLVFSL LTDNSPTRRA VAEEIARQWS AIGVQIVIEP VEPTEMQRRL
ETHEFTIALH GWQRLGSDPD VFELWHSSQA ERGRNYAGLA DATIDEILSS ARKIYDITDR
AELYREFQER WVELAPGIIL YQPILFHATV ADLGDTIAVP PDAAASPHLL IGREGRFVNV
NRWYLRSARE IRGDLR
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