Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0626 |
Symbol | |
ID | 5207564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 777278 |
End bp | 778510 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640594245 |
Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
Protein accession | YP_001274998 |
Protein GI | 148654793 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.741534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.166856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACG AACGACGATG GTTCAGCATG CTCGCACTGA TGCTGGCACT GGCGCTGCTG CTGGCGGCAT GCGGCGGACA GCAGCAACCC CCCGCCACCG GTGGCGGAAC CGGCGGTGGC GCTCCATCCG GCGGACCGCC GATCAAGATC GGCGCGATCT TCGACCTGAC CGGCGCTACT GCGGACGTTG GAACACCCTA CTCCAAAGGA CAGATTGCCT TCATCGAGTG GAAGAATGCC AATGGCGGCG TTGCCGGTCG CCAGTTGCAA CTGATCAGCC AGGATTACGC CTATGAGGTG CCGCGCGCCG AGGAACTCTA CACCCAGTTC GTCACACAGG ACAGGGTAGT GGTGTTCTCC GGCTGGGGCA CCGGCGACAC CGAGGCGCTC AAGGGCAAGA TCACCGCTGA TAAGATCCCC TTCATCTCGG CATCGTACTC GGCAACGCTG GCAAACCCGG CTGAGACGCC TTACAACTTC CTGGTCGCCC CTACCTACTC CGATCAACTG ATCATCGCCA TGAAGTGGGC GCTCGACGAC TGGAAGGCGA AAGGGAAGAG CGGTGCGCCG AAGTTCGCCT ACCTGATCAA CGATAGCCCC TTCGGACGGT CGCCGCTGGC TGATGGCACC GCCTTTGCCA CGGCGAACGG CGTCGAGACG CCGCTGGAAG TGCCGTCGCC GCGCGGCGCC ACCGACCTGA CGCCGCAGTT GACCCAGATC CGCGATTTTG GCGCCAATTA CGTCTTCCTC CAGAATGTGT CGAGTCCGGC AGCACTGGCG ATCAAGAATG CAAAGAGCCT GGGTCTTGAC GTGCAGTTCG TCTGCCTGAA CTGGTGCGCC AATGAACTGC TGATCAAACT CGCCGGCCAG GATGCTGAGG GCGTGGTCGG CGCCGTTCCG TTCAGCCCGG AAGGCGAAGG CGCGAAAGTG GCGCTCGACT TCGCGCGCGA GAAGGGGATC GATTACGGCG GCGCCGACAG CACCTTCGTG CAGGGATGGA CGGCGATGTC CATCCTGGTT GCTGGCATTG AGCGAACACT GAAGGATGGC AAAGAGTTGA CCGGCGAGAA TATCAAAACC ACGCTTGAGA CGATGGGTCC GATCGACACC GGCGGCGTGA CGCTGCCGGT CGTCTTCAGC ACCACCGACC ATGCCGGTGT GAAGTCGCTG CGGATGTTCC GCGTGCAGAA CGGGAAGTGG GTGGCGATTA CCGACTTCAT CAGCGCGAAA TAG
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Protein sequence | MRNERRWFSM LALMLALALL LAACGGQQQP PATGGGTGGG APSGGPPIKI GAIFDLTGAT ADVGTPYSKG QIAFIEWKNA NGGVAGRQLQ LISQDYAYEV PRAEELYTQF VTQDRVVVFS GWGTGDTEAL KGKITADKIP FISASYSATL ANPAETPYNF LVAPTYSDQL IIAMKWALDD WKAKGKSGAP KFAYLINDSP FGRSPLADGT AFATANGVET PLEVPSPRGA TDLTPQLTQI RDFGANYVFL QNVSSPAALA IKNAKSLGLD VQFVCLNWCA NELLIKLAGQ DAEGVVGAVP FSPEGEGAKV ALDFAREKGI DYGGADSTFV QGWTAMSILV AGIERTLKDG KELTGENIKT TLETMGPIDT GGVTLPVVFS TTDHAGVKSL RMFRVQNGKW VAITDFISAK
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