Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0592 |
Symbol | |
ID | 5207530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 740337 |
End bp | 741470 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594211 |
Product | permease |
Protein accession | YP_001274964 |
Protein GI | 148654759 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.568348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000859412 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTCAATC GTCCGACGTT GACCGCTGCG CGTGGATCGT TCGAGCGCGT GATGCCGATC ATTTCACTTG CAGCGCTGGC GCTGATCGTC GGGATGGCGC TGTTCCAGAG TGCGAGCGCG TGGCTGGCAG GCGCCGAAGC CAAAAGTATT GTGCCGGTCT TTGAAGCGCC GATTGCACAG GCCGGGAAAG CATTGGGGAA AGCGCTGACC GAATGGATGC CAGCATGGAT CGTGCCCACT CCGTTCGGAC CGATCGACGT GAAATATACT GCATCGTACA CGATCTACGA ATGGTTCAAA CTGCCGATCA TCCTGTTTCT GACCACGTAT GGCATGGCGC TGCTCCGCCT GCGCATCAGC ACAACGTGGA TCGAGCGCAC CATCGGGCGC AACGACCTGA TCGGCGCGGC TGGCGGGACG CTGATGGGGA TGGTGACCCC GGTCTGCTCG TGCACGGTGA CGAACCTGTA TGTCGGGCTT GTTGCCGGCG GCGCCAGTCA GCGCGCTTCG TCCGCCTTTT TATTTGCCAG CCCGGCGTTG AATGAATTTG CGATCATTTT CATGTTCGTT ATCGTCGGTC CGACCGGCGC ACTCATCTAC GTTCTGGCAG GGATCGCTGC GGCGCTGGCG ACGGCGTATC TGGCGCCGTT GCTGGGACTC GATCCGGCGC GGTTTGTGCA ACACCACCTG CCCGACCATG CCAGTTGCGG GTGTGTCAGA GAAAGCATCC TGACCCGTGC GCATCGTGAG GCTTGGACAC TGTTCAAACG ATTATTCGGC GTCGTGCTGT TCAGCGGATT GCTGGCGGGC ATTCTGGTCA ATTTCAATCT CACTCTGGTC GAGTACCTCA AGCAGGCTGG CGCCGTATGG TGGGGTCCGA TCGCGGCTAC GCTGCTGGGA TTGCCGCTCG ACATCAATGC TGCATCAACG GGACCGATCC TGGTGGCGCT CCACCAGATC GTGCCGATTG GGACATTGAT AGCGGCAATG ATGGCAACCA CGGTCTCATC GATCCCGGAA TGGGCGATGC TCGACCGGTT GCTTGGTCGC ATCAACGCCA TCAAGGTTGT GCTCTGGTAT GCAGCGTATG TGATACTGCT GGGACTGTTG CTCAACTGGA TGTTCGGATC ATAA
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Protein sequence | MLNRPTLTAA RGSFERVMPI ISLAALALIV GMALFQSASA WLAGAEAKSI VPVFEAPIAQ AGKALGKALT EWMPAWIVPT PFGPIDVKYT ASYTIYEWFK LPIILFLTTY GMALLRLRIS TTWIERTIGR NDLIGAAGGT LMGMVTPVCS CTVTNLYVGL VAGGASQRAS SAFLFASPAL NEFAIIFMFV IVGPTGALIY VLAGIAAALA TAYLAPLLGL DPARFVQHHL PDHASCGCVR ESILTRAHRE AWTLFKRLFG VVLFSGLLAG ILVNFNLTLV EYLKQAGAVW WGPIAATLLG LPLDINAAST GPILVALHQI VPIGTLIAAM MATTVSSIPE WAMLDRLLGR INAIKVVLWY AAYVILLGLL LNWMFGS
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