| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0589 |
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| Symbol | |
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| ID | 5207527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 737231 |
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| End bp | 738148 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594208 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001274961 |
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| Protein GI | 148654756 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.352095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000774187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGACT CCCTGTACAA GAAACTGCTC GATGAGATGT ACGACGGGGT CTACTTTGTG
GATCGTCAGC GGAGGATTAT GTACTGGAAT CGTGGCGCCG AGCGCATCTC CGGGTACAGC
GCCGACGAGG TGATCGGTCG TTTCTGCGGC GATAATCTGC TGCGTCACGT TGATGCGTGT
GGACGGCGCC TGTGCACCGG CATGTGCCCG CTTGCCGCCG CCATGCACGA TGGTCAACCC
CGGCAGGCTG AGGTGATCCT GCACCATAAG CAGGGGCATC GCGTTCCGGT GCTTGTGCGC
GTCACGCCGA TCCGCGATGC GCAGGGCGCG ATCATCGGCG CTCTCGAGGT GTTCAGTGAC
AACTCACGCC AGAAAGCGGC GCAGGAAGAG ATCGAGCGCC TGCGTGCGCT GGCGTTGCTC
GATCCGCTGA CCGGCATCGG CAACCGGCGC TTCATCGAAA GCAATACGCA TAGCCGGCTG
GAAGAACTGC GTCGCTATGG ATGGACCTTT GGGGTCATCC TGATCGATAT CGATCACTTC
AAGGCGGTGA ACGACAGGTT TGGGCATCTG GTTGGCGATG ATGTGCTGAA GATGGTGGCG
CGCACCCTGG CACACAACAT TCGCGCGTTC GATGTAGTGG GACGGTGGGG CGGCGAGGAG
TTTGTCGTTA TTGCGCAAAA CGTCAGTATT GCGACACTGG AATCGCTTGC CGAACGCCTG
CGCGTTTTCA TTGAACAGTC GTCACTCCCT GTTGCCGATA AGGTGGTTCA CGTGACAGTT
TCGCTGGGTG CAACGCTGGC ACGGCGGACT GATACGCCTG CCAGCATCCT TGGGCGGGCA
GATCAGATGC TGTATGTCAG CAAACAACGC GGGCGCAATC GGGTATCGGT CGAAGAAGAC
ACTTCTGTTC TTATTTGA
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| Protein sequence | MDDSLYKKLL DEMYDGVYFV DRQRRIMYWN RGAERISGYS ADEVIGRFCG DNLLRHVDAC
GRRLCTGMCP LAAAMHDGQP RQAEVILHHK QGHRVPVLVR VTPIRDAQGA IIGALEVFSD
NSRQKAAQEE IERLRALALL DPLTGIGNRR FIESNTHSRL EELRRYGWTF GVILIDIDHF
KAVNDRFGHL VGDDVLKMVA RTLAHNIRAF DVVGRWGGEE FVVIAQNVSI ATLESLAERL
RVFIEQSSLP VADKVVHVTV SLGATLARRT DTPASILGRA DQMLYVSKQR GRNRVSVEED
TSVLI
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