Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0414 |
Symbol | |
ID | 5207350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 529612 |
End bp | 530814 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594040 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001274795 |
Protein GI | 148654590 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.71017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGT ATCTTATCCG TCGCCTGATT CAAATGGTCA TCGTCGCCAT TCTTTCGGCG ATGCTCGGCT ACTCGTTGTT ATATATTGCG CCGGGCGGAC CGTTGTTGTT TTTGCAGCAG ATGCAGAATA CCGGGCAGCG CCGGGTGACC GAAGAAGATA TTGCGCGTTT GAAAGCTCGC TATGAACTTG ATCTCTATCT CCCCATCCGC TTTACCCGCT GGTTGATCGG CTTCCCTGCC GGTCCTGTGC AGATCGGCGG GGTGAATCTG ATCCCGCCGG ACACGGTTGT CGGGTGTGCA ATCCCCGGTC AGGTGCGCCT GCGCTACCCC GATGGCACGG TTGAGATCAT CGAGGAGGGG TGCGTCCGGG TGGTAACACT GGCGAATCTG GCGGAGCGCC GCACGAGTCG CGGCATTCTG TTTGGCGACT TCGGTCTGTC GCAGCAGATT GCGCGTGATC GCCCGATCAG CGATCTGCTG ATGAGTCGCC TGCCGTATAC GCTGCAATTG ATGGGCGTTT CGACGTTGCT GGCGATTATG ATCGGTGTGC CGGTGGGCAT CTATTCGGCG GTGCGTCAGT ATTCGCGCTT CGACTATGCG ATGACCGGCA TTACCTTCAT CGGGTCATCG CTGCCAACCC TGTTCATGGG GGTCATGGCG ATCCTGATCT TCTCGGTGCT GGCGAAGGAT GCCGGGTTGC CCTACCTGCC GTCGGGCGGT GCGCAGGGTA TTCGCAACTA CGATATTCCG TGGGTCGGGA CGGTGCAGGC CGGTTCGGCG CTTGATCGCA CCCTGCGCTT TATTATGCCG TGCGCGGTGT TGACGTTTTT CAATATCGCG GGGTGGAGCC GTTTCATTCG CGCCAGTATG CTCGAAGTGC TGCGGCAGGA TTATGTGCGC ACAGCACGCG CGAAAGGCGT GCGCGAACGG GCAGTGATTA CCAGGCACGC GCTGCGCAAT GCGTTGATCC CGTTCGTGAC CCTGCTCGCG GGGGTGCTGC CAACGCTGGT TGCTGGCGCA GCCATTACCG AATCGGTGTT CAACTGGCCC GGTATGGGGC GGTTGCTGGT CGATGCGCTT GGACGCAGCG ACTATACGGT TGCTATGTCG ATCCTGTTCA TCAGTACCGT TCTGGTGTTG ATTGGTTATC TCATTTCCGA CATCCTGTAC ACGGTTGTCG ATCCGCGCAT CCGGCTCACG TGA
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Protein sequence | MTTYLIRRLI QMVIVAILSA MLGYSLLYIA PGGPLLFLQQ MQNTGQRRVT EEDIARLKAR YELDLYLPIR FTRWLIGFPA GPVQIGGVNL IPPDTVVGCA IPGQVRLRYP DGTVEIIEEG CVRVVTLANL AERRTSRGIL FGDFGLSQQI ARDRPISDLL MSRLPYTLQL MGVSTLLAIM IGVPVGIYSA VRQYSRFDYA MTGITFIGSS LPTLFMGVMA ILIFSVLAKD AGLPYLPSGG AQGIRNYDIP WVGTVQAGSA LDRTLRFIMP CAVLTFFNIA GWSRFIRASM LEVLRQDYVR TARAKGVRER AVITRHALRN ALIPFVTLLA GVLPTLVAGA AITESVFNWP GMGRLLVDAL GRSDYTVAMS ILFISTVLVL IGYLISDILY TVVDPRIRLT
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