Gene RoseRS_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0372 
Symbol 
ID5207307 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp473366 
End bp474530 
Gene Length1165 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID640593997 
Producthypothetical protein 
Protein accessionYP_001274753 
Protein GI148654548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00445364 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00020178 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGCAC GCCGGACCCT TCACGTGTCC GTCGAGGAGC GGGAGGCCCT CGAAGACCTG 
CGCGATCACG CCCCCAAGCC CTATGTGCGC GAACGGGCGG CGGCATTACT GCTCATCGCG
TCTGGCGTAC CGCCTGCCGT CGTGGCCCGC GAACGCTTGC TGCGTCCGCG CCATCCGGAA
ACCGTCTCTC GCTGGCTGAA GCGCTGGGAC GCCGAGGGCA TCGATAGCCT CCCCATCCGG
GACGGACGCG GGCGCACGCC CGCTTTTTCC CCCTGACCGC CATGACCCTG AGACGGCGGC
TACTGAGGTG GAGCATCTGG TCCGCCGTGA CCCGCGGCAG TGCGGGCTGA CCCAGACGCG
CTGGACCCTG GACGCCATCC GCAGCCCGTT GGTGTGGGGA CGCGACGCCT CGCTGAGCGG
GATCGCCCGC ATCCTGGATC GGTTGGGCAT CACCTGGCAG CGCGCCCGCA GTCATGGGCC
TCGCCCTGAT CCTCACGATC AGGCCAAACT GCAGGAGAGT GCGGACGTGG TGGAGGATGC
CCGCGCGCAC CCCAACCAGG TGGTGACCGT GGATCTGGAT GAAGTCACGG TCACCCGGCG
CCCGACCCTG GCCAACGGGT ATGGGCGGGC GGGCGCCGAT CAGGTGCGGG CGGAACGGAG
TCTGGCGACC GATGGTGACC TGCGCATCGT GGGCAGGTTG GACGTCGTGA CGGGCCAGGT
GGTCACCCGG CGGGCGAAGA CGATGGGCCT GGCGACGCTG GCGCCGTGCT TCCCGGACCG
GCGCGCTGCC TATCCTGAGG CTGAGCGCAT CGATGTCATT CTGGATAATT GGCCGGTCCA
TGGTCATCCG GATGTCCTGG TGGCGCTTGA GCCGCAAACG ACCCGCTGGG CGTTTTCCCG
TCCTGGCAAT GGGCCGGCCA CCCCCAGTGG ACGGGCCGTG CGCCGGGCTG GAGATGTCCG
CCGGCCCATC CAACGGATGC CGGCGCCGAC GGATGCGTCG TGGTGCAACC CGATCGAGAC
GCTGTGGCGG TGGATGCGTC AGGAGGTCAC CCGCGTGCAT CGCTGGGCGA CGGATCTCGA
TCAGTTGCGC AGCCATCTGG ATGCCTTCTT CGCGTCATTT GCAACCGGCT CGCCAAAGCT
TTTACAGTAT GTCGGTCTCG GATAG
 
Protein sequence
MPARRTLHVS VEEREALEDL RDHAPKPYVR ERAAALLLIA SGVPPAVVAR ERLLRPRHPE 
TVSRWLKRWD AEGIDSLPIR DGRGRTPAFP PDRHDPETAA TEVEHLVRRD PRQCGLTQTR
WTLDAIRSPL VWGRDASLSG IARILDRLGI TWQRARSHGP RPDPHDQAKL QESADVVEDA
RAHPNQVVTV DLDEVTVTRR PTLANGYGRA GADQVRAERS LATDGDLRIV GRLDVVTGQV
VTRRAKTMGL ATLAPCFPDR RAAYPEAERI DVILDNWPVH GHPDVLVALE PQTTRWAFSR
PGNGPATPSG RAVRRAGDVR RPIQRMPAPT DASWCNPIET LWRWMRQEVT RVHRWATDLD
QLRSHLDAFF ASFATGSPKL LQYVGLG