| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0352 |
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| Symbol | |
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| ID | 5207287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 449285 |
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| End bp | 450589 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640593978 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001274734 |
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| Protein GI | 148654529 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.321717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGAGCG CGACTTTGGT TGATCCTGTT GAACATGCCC CATCTGCAAC CTGGCCCGAT
ACGCTGGAAC TCACCCTTGA CGGCATTGCC CAGGGCGGCG ATGCCGTCGG GCGCTGGCAG
GAACGGGTGG TGTTCGCTGC CGGTGGCATT CCCGGCGAGC GCGTCGTCGT GCGCCTGCGC
GAACGGCACG AGTCGTATGC GCGCGGGGAT GTGGTAGCTG TGCTCATCGC TTCACCTGAT
CGGGTAGAAC CGCGTCTCCC CGGCGCGAGC CATATGCCAT GGCAGCATAT CTCTCTTGCT
GCCCAGCAAC GTTTTCGCCG CCAGATCCTT GCCGATCAAC TCGCCAAGTT TGCCGGTGTT
GCGCCGGAAC TGGTCGAAGC GACCGCGCCA GCGTCGAAAC CGTGGGCATA CCGCAGCAGC
GCCCGGCTGC ACTGCGAAAG GCGACGAGTC GGCTACTACG CTGCGGATAC GCGGTTGATC
ACCGAACTCG ATCGTGATCC GCTGCTGCAT CCAACCCTGA ACCAGGCGCT TGCAGCGTTA
CGCGATGCGC TCGCCGGTGA ACCAGACGAT GATCAGCCGC TCGATGTAAC GTTGCGCGTC
AGCGAAGCGC ACGGGTATTG CATCGCTGCC ATGCGCGGAC GCGGTGAGCG GCGACGGCTG
GCGGAACGCT GGCGGTCGCT CTGTCCACCG CTCGCGGGCG TCGTTTTTAC CGTTCCGCCG
CCGCATACCG TTCCCCCTGT CGGCGTTGAT ACGCTCGTCG AGGAGTTGGA CGATCTGACG
TTTCTGTTGC GCCCGACGAC GTTCTTTCAG GTGAATGTCG CCGCTGCCAC GACGTTACTG
AACCTGATCC GCGCCGGTCT TGGCGACGAA GCTGGCGGGC GTCTGCTCGA TCTCTACTGC
GGCGCGGGGA CGTTTACCCT GCCCCTGGCA CGCGCTGCTA TCCAGGTTGT CGGCGTTGAG
GAGTATCCCG GCGCAGTTGC CGATGCTGAG CGGAGTGCGG CGGTTAACCA TGTCTCAAAT
GTGCGCTTTG TTGTCGGTCG TGCCGAAGCA GTGTTGAGCA GTCTCGAAGG CGATTTCGAC
GCGATCGTCC TTGACCCGCC GCGGCGCGGA TGTCACCCAC AGGTGCGACA GGCGCTGCTC
GAACGCGCGC CACGCCGGAT CGTCTACGTC TCGTGCCATC CGGCAACCCT TGCGCGCGAC
CTGCATACCC TGATCGGCAG CTACACGGTC GAGCGCGCCA CGCCGGTCGA TCTCTTCCCG
CAAACGCCGC ATGTTGAGAG TGTGGTAGTG CTGGTGCGAT CCTGA
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| Protein sequence | MASATLVDPV EHAPSATWPD TLELTLDGIA QGGDAVGRWQ ERVVFAAGGI PGERVVVRLR
ERHESYARGD VVAVLIASPD RVEPRLPGAS HMPWQHISLA AQQRFRRQIL ADQLAKFAGV
APELVEATAP ASKPWAYRSS ARLHCERRRV GYYAADTRLI TELDRDPLLH PTLNQALAAL
RDALAGEPDD DQPLDVTLRV SEAHGYCIAA MRGRGERRRL AERWRSLCPP LAGVVFTVPP
PHTVPPVGVD TLVEELDDLT FLLRPTTFFQ VNVAAATTLL NLIRAGLGDE AGGRLLDLYC
GAGTFTLPLA RAAIQVVGVE EYPGAVADAE RSAAVNHVSN VRFVVGRAEA VLSSLEGDFD
AIVLDPPRRG CHPQVRQALL ERAPRRIVYV SCHPATLARD LHTLIGSYTV ERATPVDLFP
QTPHVESVVV LVRS
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