| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0240 |
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| Symbol | |
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| ID | 5207175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 300689 |
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| End bp | 304039 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593870 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001274626 |
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| Protein GI | 148654421 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.956133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00192271 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTCGT CGTCCATCAC CCCCGGCAGC ATTCTTCGAG GTCCGCTCTG GCCCGAGCCG
ATCCAGGTCG ATATGGTCGA AGATATGGGC GACTATGTGC GCATCGTCGG CGCAACGGTG
CGCTCGCGCC AGCATATCGA CCAGTGGCTG AGCCGCGCCG AACTGCGCGC CATTGCATCG
GAACGGGGTG CATCCCATTT CGGCGCCGAT CCCCGTCACT TTTTCCTGGC AATTGAAGCC
TGTCGCTATC GCCTGGCATC GCTCTATGAC CCGCTGCTGG CGATGCACAC CTCCAAGGTA
GACCCGCTGC CGCATCAGAT CGAAGCCGTC TACGGGCATG CGCTCAAACT GCCGCGTATT
CGGTTCCTGA TCGCCGACGA TCCGGGCGCC GGCAAGACGA TTATGGCCGG GCTGATCATT
AAGGAATTGA AACTGCGCCA TCTGGCGACC CGCATCCTGA TCGTCGCTCC CGGACACCTC
AAAGACCAGT GGCGACGTGA ACTGAAGGAT CGTTTCGAGG AAGATTTTGT CGTTGTGGAT
CGCGCTACCC TGGGCGCATT CTACGGTCAG AATGTCTGGG CGCGCGAATC ACAGGTGATT
ACCTCGATAG ACTTCGCCAA GCAGGAAGAG GTTCTGACCG GTCTTGCGGC GGTGCAGTAC
GACCTGATCA TCGTCGATGA GGCCCACAAG ATGGCGGCGT ATCGCTACGG CGACAATCTG
AGCAAGACCG ACCGCTATCG CCTGGGCGAG CGCCTCTCGG AGATCTGCAC GCACCTGCTG
TTTCTGACCG CGACGCCGCA CCGCGGCGAC CCGGAGAACT TCCGCCTGTT CCTCGATCTG
CTCGAACCGG GGTTTTTTGC AACATCCGAT ATGCTGGCCG AGTCGATCCG TCAGCACGAC
AATCCGCTGT TCATTCGACG GGTGAAGGAG GACTTGAAGG ATTTTGACGG CAAGCCGCTC
TTTTTGCCGC GCCATGTGGC GACGATCGAG TTTAACCTGG GGGTGGAGAG CGAAGACGAA
AAGCGGTTGT ACAACGACCT GTCGCGCTAT GTGAATGCGC AGTACAATAA AGCGCTCACC
AGCGAGAAAC GCCGCAACGT CGCCTTTGCG CTGGTCATTC TGCAACGTCG GCTGGCATCC
AGCACGTATG CGCTGTTGCG CTCGCTTGAA CGGCGCAAGC GTCGGCTGGA GGAACTGCTC
CAGGGCGCGC CGCAGCGCCA GCGCACCGCC GACGAAAGCT ACGATGTCGA GGAGCTGGAC
GACCTGAGCG AGGAAGAACG CTGGCGACGG GAGGAGACTT GGGAAACGCT GAGCGTGGCG
GAAAACCGGC GTGAACTGGA GCAGGAGGTG GCCAGTCTGG ATGCGCTCAT CGCTCAGGCG
CGCGCCATCG TGAATGCTGC GCCGCCGGTC GAGGCGAAAC TGCGCCATCT GCGCGCTGCC
CTGGAACAGT TGAACCAGAA TCACCCTGGC GAGAAAATCC TGATCTTCAC CGAATCGCGC
GATACGCTGG AGCACCTGGA GAAAAACGTG CGGCTCTGGG GCTACTCCGT CTGCACCATC
CATGGCGGGA TGGATCTGGC GTCGCGCATT CAGGCTGAGA AAACCTTCAA GAACGAGGCG
CAGATCATGG TGGCGACCGA GGCGGCCGGC GAAGGGATCA ATCTCCAGTT CTGTCACCTG
ATGATCAACT ACGATATTCC CTGGAATCCC AACCGCCTGG AACAGCGCAT GGGGCGCATT
CACCGCTACG GTCAGACGCG CGAAGTCTTC GTGTTCAACC TGGTGGCGAC CGACACGCGC
GAGGGACGGG TGTGGCAGGC GGTGTTTCGC AAACTGGAAG AGATCCGCCA GGCGCTCGGC
AGCGATAAGG TCTTCGATGT GCTGGGCGAT CTGATCCACG GGAAAGACCT GGGGCAACTG
CTCCTGGAGG CGGCAGCCGG CGCGCGCAAC ATCGACGACA TCCTGCGCGA GATCGATATC
CGGGTAGACC CGGCATACCT TGACCGCATC CGCGATCAAC TCGGCGAAAG CCTGGCGACC
CGCTTCATCG ATTACACCCG CATCCGCGAG ATGGCGGAAA AGGCGCGTGA GCAACGCCTG
ATCCCCGAAT ATACCGAAGC GTTCTTCCGC CAGGTGATCG AGACGTTGCA GGGAAAACTC
AGGGAGATCG GCGGGAAGTC CGGTCCGTTT CTCGCGCTGG AGAGCGTGCC GGCGCCGCTG
CGCCAGATCG CCGACGAAGA TGCCTTCAAA AAACGGTTCG GCGCGTTATC CCGCCGCTAC
CCGCGCATCA CGTTCGATAA AACCGTCGCC ATGCGCGACG CACAGGCGGA GCTGGTGACG
TTCGGTCATC CGCTCTTCGA GGCGGCGATG GCATGGGTTG AGCGGTCGCT GCATGCGGCG
CTGCACGAAG GCGCGCGGTT CACCGACCCC GACGGCGGTA TGGATGGAAC GTTGCTCTTC
TACGAGGGGG AAATCCGCGA TGGCAAGGGC GAGATTGCCG GCAGGCGACT GTTCGTGCTG
TTCGCCGACC GGCAACGCGG AACGATCCAG CCGGTCAACC CGACGCTGCT GTGGGACCTG
CAGCACGGCG GACCGCCCGA CGGCGCGTTC CCCTCGCTCG AGGCGTTGCA GCGCGATGCC
CGTGGCGTGC TGTTCCGCGA ACTGGAAGCG TATCGCGCCG CACTGCTGGA AGAACGCAAA
CGTCAGGCGA CGATCAAGGA AAAGTATGGG CTGACGTCGC TGGAGGAACT CATCATCAGA
CTGGACGGCG ACCTGATCCG GCTCTATGAG CGCCGTGACC GGGGCGAGTC GGTAGACCTG
GCGATTCGCA ATAAGGAAGA CCAGAAGCGA CGGTATGAGC AGGCGCTGGA TGCGCTGCGG
AACGCACTGG AGCGCGAACG CAACCTGACC CTCTCCACGC CGCGTTTTCT GGGCGCGGCG
AGGGTTGTGC CGGCGCCCGT CGCTGCGGAG ATGTTCTCCG ACCCGGACAT CGAGCGGGTT
GCGATGCAGG TGGCGCTGGA GTATGAACGG AGTCAGGGGC GCGTTCCTGA AGACGTTTCG
CGCGACAATC TGGGCTTCGA TATTCGTTCG CGCGCGGCTG ACGGGCAGCA GCGCTATATC
GAGGTCAAAG GGCGCGCCGA TGCTGGCGCA GTGGCGTTGA CCCGCAACGA GTGGTTCAAG
GCGCAACGCT TCGGTGACGA GTATTTTCTG TATGTCGTGT TCGACGCCGC CACGCCCCAA
CCGACGTTGC ACTGCATCCA GAACCCGGCA GCGCGCCTGA AACCAGAGGA GCGCATGGAC
GTTCGTTACC TGGTCTCAGC CGATGACATT CGCGCACATG CTTTAGAATA G
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| Protein sequence | MDSSSITPGS ILRGPLWPEP IQVDMVEDMG DYVRIVGATV RSRQHIDQWL SRAELRAIAS
ERGASHFGAD PRHFFLAIEA CRYRLASLYD PLLAMHTSKV DPLPHQIEAV YGHALKLPRI
RFLIADDPGA GKTIMAGLII KELKLRHLAT RILIVAPGHL KDQWRRELKD RFEEDFVVVD
RATLGAFYGQ NVWARESQVI TSIDFAKQEE VLTGLAAVQY DLIIVDEAHK MAAYRYGDNL
SKTDRYRLGE RLSEICTHLL FLTATPHRGD PENFRLFLDL LEPGFFATSD MLAESIRQHD
NPLFIRRVKE DLKDFDGKPL FLPRHVATIE FNLGVESEDE KRLYNDLSRY VNAQYNKALT
SEKRRNVAFA LVILQRRLAS STYALLRSLE RRKRRLEELL QGAPQRQRTA DESYDVEELD
DLSEEERWRR EETWETLSVA ENRRELEQEV ASLDALIAQA RAIVNAAPPV EAKLRHLRAA
LEQLNQNHPG EKILIFTESR DTLEHLEKNV RLWGYSVCTI HGGMDLASRI QAEKTFKNEA
QIMVATEAAG EGINLQFCHL MINYDIPWNP NRLEQRMGRI HRYGQTREVF VFNLVATDTR
EGRVWQAVFR KLEEIRQALG SDKVFDVLGD LIHGKDLGQL LLEAAAGARN IDDILREIDI
RVDPAYLDRI RDQLGESLAT RFIDYTRIRE MAEKAREQRL IPEYTEAFFR QVIETLQGKL
REIGGKSGPF LALESVPAPL RQIADEDAFK KRFGALSRRY PRITFDKTVA MRDAQAELVT
FGHPLFEAAM AWVERSLHAA LHEGARFTDP DGGMDGTLLF YEGEIRDGKG EIAGRRLFVL
FADRQRGTIQ PVNPTLLWDL QHGGPPDGAF PSLEALQRDA RGVLFRELEA YRAALLEERK
RQATIKEKYG LTSLEELIIR LDGDLIRLYE RRDRGESVDL AIRNKEDQKR RYEQALDALR
NALERERNLT LSTPRFLGAA RVVPAPVAAE MFSDPDIERV AMQVALEYER SQGRVPEDVS
RDNLGFDIRS RAADGQQRYI EVKGRADAGA VALTRNEWFK AQRFGDEYFL YVVFDAATPQ
PTLHCIQNPA ARLKPEERMD VRYLVSADDI RAHALE
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