Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0228 |
Symbol | |
ID | 5207163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 280090 |
End bp | 281766 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640593858 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001274614 |
Protein GI | 148654409 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAC GTCCCTGGCT TGCCTGGTAT GATCCCGGCG TTCCTGCCGG GATCGTTGTG CCGGATAGCA CATTGCCCGA TCTGTTGGCG ACAGCAGCGC GCGAATATCC GGCTGCGCCG GCAATCCTGT TTTACGGGCG GGTGATCGAC TATGCCATAT TCGACCGCCT GGCAACCCGC TTTGCCGTTG CTCTGCGCAA CGCCGGTGTT GCGCCCGGCG AGCGCGTGGC GCTGGTGTTG CCCAACATTC CACAGGCGCC TGTCGCATAC TACGGAGCGC TGCGCGCTGG CGCCATCGTT GTGCTCACCA ACCCGATCTT CGAGGCGGGC GGTCTTGTAC GCCAGCTTAC CGATGCTGGC GCGACCACCC TGGTGGCATT GAGCATGTTC CATCCGCTGG TCACAGCTGT TCGCGAACGC GCCAGCGTGC ATCGGGTCAT CTATACCAAT CTGAAGGAAT TTCTTCCGCC AGGGCAGCGA CGCCTGTTTA CGCTGCTGCG TCAGGAACGT GAGGGTCACC GTGTCCCCAC CGACGAGGCG CGCCGCGCAC TCTGGATGGC GCATATGCTG GCGGATACTG CCGCTGCACC GCTGCCATCG CGCGATCCTG ATGAACCTGC GGCAATTCTG TACACCGGCG GCACGACCGG TGAAGCGAAA GGGGTGGTGC ATACCCATCG CAGTCTCGTC GCCAATGCGC TGCAAGTCGC CGCATGGTTT CCCGCAGCAC GTCGCGGCGC CGAACGGGTT GTCTGTGTGC TTCCATTCTC ACATGCCTAT GGGATGACCG CCTGCATGAA CTTTTCGGTT GCGATTGCAG CGGCGATGAT CCTGTTGCCG ACGTTCGAGA CTGCTCACGT GCTGCATGCC ATTCGCCGGG AACGCGCCAC GATCTTCCCC GGCGTTCCGC CGATGTATGC CGCAATTGCG GAGATGAGCA ATGCACGACG CTACGGGCTG TCATCGTTGC GCGCCTGCAT CAGCGGCGCC GCCCCACTGC CGATAGAAGT GCAGGAAGGA TTCGAGCGCG TCACCCGCGC CCGCCTGGTC GAAGGGTATG GATTGACCGA GGCGGGTCCG GTGACGCATG CCAATCCCCT GGGATCAGCG CACGAGCGCT ACGCGACCAT CGGCATACCC CTGCCATCGA CCGATGCGAA GATCGTTGAT GCGACCACCG GCGCCGATCT GCCGCCGGGA CGTATTGGTG AGTTGCTGGT ACGTGGTCCG CAGGTTATGC AGGGATATTG GAACCGCCCG GACGATACCG CAGATGCCTT CACGCCGGAT GGATGGCTGC GCACAGGCGA CATGGCGCGG ATGGACGCCG ACGGTTTCTT TCAGATCATC GAACGCAAAA AGGATGTTAT CATCGCCGGA CCGTACAACA TCTACCCGCG CGACATCGAA GAAGTGCTCT ATCAGCACCC CAAAGTGCTG GAAGCTGCGG TTGCCGGCAT TCCACGACCC GAGGGACGCC CGGATCTGCG CGCCTTTGTT GTCCTGCGGA AAGGAGAACA CGCCACTGCC GACGAAATTA TCGAGTTTCT CCGCGAGCGC CTGAGCGCGC ACAAGGTTCC GCATATCGTC GAATTTCGCG ATGCGCTGCC GCGGTCGTTC ATCGGCAAGG TGCTGCGGCG CGCGCTGATC GACGACGACC GTCAGAAGAA CGCATAA
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Protein sequence | MAARPWLAWY DPGVPAGIVV PDSTLPDLLA TAAREYPAAP AILFYGRVID YAIFDRLATR FAVALRNAGV APGERVALVL PNIPQAPVAY YGALRAGAIV VLTNPIFEAG GLVRQLTDAG ATTLVALSMF HPLVTAVRER ASVHRVIYTN LKEFLPPGQR RLFTLLRQER EGHRVPTDEA RRALWMAHML ADTAAAPLPS RDPDEPAAIL YTGGTTGEAK GVVHTHRSLV ANALQVAAWF PAARRGAERV VCVLPFSHAY GMTACMNFSV AIAAAMILLP TFETAHVLHA IRRERATIFP GVPPMYAAIA EMSNARRYGL SSLRACISGA APLPIEVQEG FERVTRARLV EGYGLTEAGP VTHANPLGSA HERYATIGIP LPSTDAKIVD ATTGADLPPG RIGELLVRGP QVMQGYWNRP DDTADAFTPD GWLRTGDMAR MDADGFFQII ERKKDVIIAG PYNIYPRDIE EVLYQHPKVL EAAVAGIPRP EGRPDLRAFV VLRKGEHATA DEIIEFLRER LSAHKVPHIV EFRDALPRSF IGKVLRRALI DDDRQKNA
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