| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0176 |
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| Symbol | |
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| ID | 5207111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 220779 |
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| End bp | 222059 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640593806 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001274562 |
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| Protein GI | 148654357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.379469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.234316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCCG CTTCTTCCGC TCCACCGCCG CGCAGCCGTC TTCGCCTGCC GCATGCGCTG
CGTGCGCTGC GTCACCGTAA CTATCGCCTG TTGTTCTTCG GGCAGTTGAT CGCGCATATT
GGCTTCTGGA TGCAGGCGAC TGCGCAAGGA TGGCTTGTGC TGCGCCTGAC TGACGCGCCG
TTCTGGTTGG GGGCGATTGC TGCGGCGCAG TCGCTGCCGG TGTTGATCCT CTCTGTTCCT
GCCGGTGCGC TGGCGGATCG TGTTCCCAAG CGCACCCTGC TGTTGATAAC CCAGGGAACC
GCGATGACGA CCGCATTGCT GCTGGCGATG CTGATCTTCG GCAATGCGGC GCAGGTGTGG
CATGTGCTGA TCGCCGCCCT GCTGGTCGGC GTCGCCTCAG CCTTCGAGAA CCCGGCGCGC
CAGGCGTTCA CTATCGAACT GGTTGGACGT GATGATCTGA TGAATGCGAT TGCGCTCGAC
TCAACCGTCA TGAACGGCGC GCGCATCATC GGACCGGCGG TCGCCGGGGC GCTGGTTGCC
GCCACAGGTG AAGGTCCGGC GTTTCTGTTC AATGGTCTGA GTGTCCTGGC AGTCATCGGC
GGGTTGCTCA TGATGCGCCT GCGTCCATTC GTCGCGCCGC CACGCCGCAG CAACTGGCAG
CAGATGCGCG AAGGGTTCGC CTATATTCGC GGCGACGTGC GCGTGCGTTT GTTGTTGCTC
CAGATCACAG CGCACTGCGT CTTTGGTCTG GCATACTTCC CGCTCATGCC CTACTTTGCG
CGCAATGTGC TCGGCGCCGA TGCACAGGGA TTTGGCGTGC TGGCATCAAC GAATGCCGCC
GGGGCGCTGG TTGCCGCGCT CATGATTACC TTCGTCGGCG ACCGGTTGCC ACGGGTCGGG
GTGCGCTCGG TTGCACTGCT CAGTTACTCG CTGCTGCTCG GCGCATTCAC ATTGACACGC
TCGTTCGCGG TGGCAATGGC GTTGCTGGCG GCAATCGGAT GGGCGGGCAT TGTCGTGCTG
ACGTTGACAA ACACTCTGTT GCAGATGGTA ACGCCCGATG AGATGCGCGG ACGGGTTATG
GGGGTCTACA TGCTGGTGGT CATGGGAGTC AGTCAGATCA GCGGACTGAT CCTCAGCAGT
GTGGCGGATG TTATCGGCGA TGTGCCGCTG GTCGTCGGAT GCTGGACGAT GATCGGATGG
TGTGTTCAGA TCTATCTGTT CGGGCAGTGG CGTCGTCTGT CGAGCGCCGC CGCGCAGGTT
GCGCCGCTGC CGCGTTCATA A
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| Protein sequence | MSSASSAPPP RSRLRLPHAL RALRHRNYRL LFFGQLIAHI GFWMQATAQG WLVLRLTDAP
FWLGAIAAAQ SLPVLILSVP AGALADRVPK RTLLLITQGT AMTTALLLAM LIFGNAAQVW
HVLIAALLVG VASAFENPAR QAFTIELVGR DDLMNAIALD STVMNGARII GPAVAGALVA
ATGEGPAFLF NGLSVLAVIG GLLMMRLRPF VAPPRRSNWQ QMREGFAYIR GDVRVRLLLL
QITAHCVFGL AYFPLMPYFA RNVLGADAQG FGVLASTNAA GALVAALMIT FVGDRLPRVG
VRSVALLSYS LLLGAFTLTR SFAVAMALLA AIGWAGIVVL TLTNTLLQMV TPDEMRGRVM
GVYMLVVMGV SQISGLILSS VADVIGDVPL VVGCWTMIGW CVQIYLFGQW RRLSSAAAQV
APLPRS
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