| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0100 |
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| Symbol | |
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| ID | 5207033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 119781 |
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| End bp | 121622 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640593732 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001274491 |
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| Protein GI | 148654286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.148242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC GGAACGACAT TCGGAACATT GCGATTATTG CCCATGTGGA CCACGGCAAG
ACCACGCTGG TCGATGGGTT GCTGCGTCAG GGTCGCATTT TCCGCGATAA TCAGCAGGTT
GCTGAGCGCG TGCTGGACTC GAACGACCTC GAGCGCGAAC GCGGCATTAC AATTATGGCG
AAGAATACCG CCGTCACCTA TCGCGGCGTC AAGATCAATA TCGTCGATAC GCCAGGACAC
GCCGACTTCG GCGGGGAAGT CGAACGTGTG ATGAATATGG TCGATGGCGT GCTGCTGCTG
GTCGATGCTG TCGATGGTCC TATGCCGCAA ACGCGGTTCG TGCTGCGCAA AGCATTGCAG
GCGGGGCATC GCGCGATTGT CGTCGTCAAC AAGATTGATC GTCCCAACGC CCGCCCTAAC
CACGTTGTCA ACGAAACGTT CGACCTGTTC ATCGAACTTG GCGCCACCGA TGAGCAGGCG
GAGTTTGCAA CTATTTACAC GAATGCGCTC AAAGGGGTTG CCGGTCGATC ACCGCTCAAA
ATCCACGACT CGCTCGAGCC GCTGTTCGAC GCTATCCTCG ACCAGATACC TGCGCCGGAG
GTCGATCCGG ACGGACCGGC GCAACTGCTG GTGACCAATA CGGTGTACGA CGATTATAAG
GGAAAGATTC TGATCGGACG CCTGCGGCGC GGTGTGCTGC GCAAAGGGCA GATGGCGGCG
CGGATTGCAC GCGATGGCAG CGTCACTACG GCAAAGATCG GTCAACTCTT CGTCTTCAAT
GGGCTGGAGC GGCGTGAGGT CGAAGAAGTC ACGGCAGGCG ACATTATTGC TATCGCCGGG
ATTGGCGACG CCGGTATCGG GGATACGATC AGCGATGCCC ATCATCCGGA ACCGCTGCCG
CCAATCGCTG TCGAAGAGCC GACGGTGCGG ATGACCTTCA GCGTGAATAC CAGCCCGTTT
GCCGGACGTG AAGGGACACA CGTGACGTCG CGGAAACTGC GCGAACGTCT CTATCAGGAA
CTCGAACGCG ATGTGGCGCT GCGCGTCGCC GATACCGCCT CGCCCGACGC TTTCACCGTC
AGCGGACGCG GTGAACTGCA TCTTACCATC CTGATCGAAA CGATGCGCCG TGAGGGGTAC
GAGTTTCAGG TGTCGCGCCC CGAAGTGATC TTCAAAGAGA TCGATGGCGT TAAGTACGAA
CCGATCGAAC AGGTCGAACT GGAAGTCGCC GAACAGTATC AGGGCGCGGT TATCGAGTTG
ATGGGACAGC GGCGCGGACA GATGCGCGAT ATGAGCATCC GTGACGGCGG ATTGGTCCAC
ATGATCTTCC ACGTTCCTAC CCGCGGTCTG CTCGGTTTTC GCCAGACGTT TCTGACGGCG
ACGCGCGGCG AGGGGGTGAT GAACTCGCTG TTCATCGGTT ATGAACCGCT GGCGGGCGAG
ATCGTCACCC GCACCAACGG CTCGCTGATC GCTTCCGAAA GCGGTGTCGC TACGGCCTAC
GCTCTCAACC AGGCGCAGGA GCGCGGCACG CTCTTTATCA CACCCGGCGC CGAGGTCTAC
GAGGGTATGA TCGTCGGGCA GCACATCCGC GAGCGCGACC TGGAGGTGAA TGTCTGTCGT
CGCAAGCATC TCACCAACAT CCGTTCTTCG ACGGCGGAAG AAGGGATCCG GCTGGAAACG
CCGCGCATCC TGAGCCTCGA CGATGCTATC GAGTATATCA GCGATGATGA ACTGGTCGAA
GTGACCCCCA AGAGCATCCG CCTGCGCAAG CGGTTGCTGA CCCTCAATGA GCGTCAGCGT
GAACAGAAAC GGCGCGAGAT GATGCTGGCA GGGGAGCGGT AA
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| Protein sequence | MIRRNDIRNI AIIAHVDHGK TTLVDGLLRQ GRIFRDNQQV AERVLDSNDL ERERGITIMA
KNTAVTYRGV KINIVDTPGH ADFGGEVERV MNMVDGVLLL VDAVDGPMPQ TRFVLRKALQ
AGHRAIVVVN KIDRPNARPN HVVNETFDLF IELGATDEQA EFATIYTNAL KGVAGRSPLK
IHDSLEPLFD AILDQIPAPE VDPDGPAQLL VTNTVYDDYK GKILIGRLRR GVLRKGQMAA
RIARDGSVTT AKIGQLFVFN GLERREVEEV TAGDIIAIAG IGDAGIGDTI SDAHHPEPLP
PIAVEEPTVR MTFSVNTSPF AGREGTHVTS RKLRERLYQE LERDVALRVA DTASPDAFTV
SGRGELHLTI LIETMRREGY EFQVSRPEVI FKEIDGVKYE PIEQVELEVA EQYQGAVIEL
MGQRRGQMRD MSIRDGGLVH MIFHVPTRGL LGFRQTFLTA TRGEGVMNSL FIGYEPLAGE
IVTRTNGSLI ASESGVATAY ALNQAQERGT LFITPGAEVY EGMIVGQHIR ERDLEVNVCR
RKHLTNIRSS TAEEGIRLET PRILSLDDAI EYISDDELVE VTPKSIRLRK RLLTLNERQR
EQKRREMMLA GER
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