Gene RoseRS_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0089 
Symbol 
ID5207022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp101445 
End bp102497 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content60% 
IMG OID640593721 
Producthypothetical protein 
Protein accessionYP_001274480 
Protein GI148654275 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0416134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0758597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGGC ATCGCTGCAA GCAACATTGC GCGCGGCTGA CCCGCGCTTC TGGAGAGGCT 
CCCTTGGTGC GCAATTGGAA GTTGTGGCTG GGAATCGTCG TGAGCGCCGT TTGTCTCTGG
ATTGCGCTTC GCGGTCTCGA TTTCCAGACG TTCTGGCAGG TTATGCGTCA GGCGAACTAC
TGGTGGCTTG CGCCTGGCGT CGGTGTGTAT TTCCTCGCGG TCTGGGCGCG CACCTGGCGC
TGGCACTACA TGCTGCGTCA CCTCGCGCCG ATTCCTGTAT CCCGCCTGTT CCCCATCGTC
GTTATCGGGT ATATGGGCAA TAATGTGTAT CCGGCGCGCG CAGGCGAGGT GTTGCGGTCG
TATGTCCTGA GGCGTAAGGA GCGCGTGCCG ATCAGTGCAT CCCTGGCGAC TGTGGTGCTC
GAACGCCTCT TCGATGGTCT GGTGATGCTC CTGTTCGTCT TCGTGACGCT GCCGTTCGCC
CCTCTACCTC CAGTGTACTC ATCGCTGGTC ACCGTCCTCA GTGTCGTCTT TCTGGCGGCG
CTGGCAGCAT TTCTGGTCAT CGCCGCGCGC CCAGAACGCA TGAGCCGGAC GTATGCCTGG
ATAGTCGAGC GGTTCGTGCC GGTGCGTTTC CGTTCTCTTG TTCACGGGTT GTTCGACCGC
TTTGTCGAAG GGTTGCAGTC GCTGCGCAGT CCGCGCGACC TGGCGTTGAT CTTTGTGTCA
TCAACGCTTA TCTGGTTGAC CGAAACCGGT AAGTATTGGT TCGTGATGCA TGCCTTTCCG
TTCGAGACAT CGTTCCTGGT GCTGATGCTG ATGACGGCAG TGGTGAATCT GTTTACGACC
CTCCCTTCGA CTCCCGGATA CATCGGTACG TTCCATGTGC CCGGTATTGC TGTGTTGATG
GCGTTCAATG TCGATCAGGC AATCGCAACC AGTTATACCG TCGTGTTGCA CGTGGCGCTC
TGGCTGCCGA TCACTGCGCT TGGCGCCTGG TATATGATCA GTGAGCACCT GGGGTGGGGC
GATTTCGGCA GGGCGACGGA GGCGGTGCAG TGA
 
Protein sequence
MPRHRCKQHC ARLTRASGEA PLVRNWKLWL GIVVSAVCLW IALRGLDFQT FWQVMRQANY 
WWLAPGVGVY FLAVWARTWR WHYMLRHLAP IPVSRLFPIV VIGYMGNNVY PARAGEVLRS
YVLRRKERVP ISASLATVVL ERLFDGLVML LFVFVTLPFA PLPPVYSSLV TVLSVVFLAA
LAAFLVIAAR PERMSRTYAW IVERFVPVRF RSLVHGLFDR FVEGLQSLRS PRDLALIFVS
STLIWLTETG KYWFVMHAFP FETSFLVLML MTAVVNLFTT LPSTPGYIGT FHVPGIAVLM
AFNVDQAIAT SYTVVLHVAL WLPITALGAW YMISEHLGWG DFGRATEAVQ