Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0088 |
Symbol | |
ID | 5207021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 100102 |
End bp | 101448 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640593720 |
Product | hypothetical protein |
Protein accession | YP_001274479 |
Protein GI | 148654274 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.220394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.164147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGGTTG CGATTATTGG CGCGGGGGTT GCAGGATTGA CCGCCGCCTA CGATCTGGCG CGTCGCGGCC ACGCGGTCGT GGTTTATGAA GCAGCGTCGG TTGCGGGCGG ACTTGCTTCG GGGTTCCGCG ATGAACTCTG GGAATGGCCC CTCGAACGCT TCTACCATCA CCTGTTCGAG AGTGATACTG CCATCAGGTC GCTGGTGCAG GAGATAGGGT TCGCCGACCG TCTCTTCTTC CGCCGACCGA TCACGGCGCA GTGGTGGAAT GGTCGCGCGT ATGCGCTCGA TGGCGTGCTG CCGGTGCTGC GTTTCCCGGC CGTGCCGTTC ATCGACCGCC TCCGTTTTGG AGTGGTCGCT GCGTACCTGA AGTATGTCAC CAACGACTGG CAGAATCTTG AAAAGGTGAC AGCTGCGGAA TGGACGTCGC GCTGGTGCGG GCCGCGTGTG TACCGCGAAA TCTGGCGTCC GCTGCTGGAG GGCAAGTTCG GTCCGCATGC CGATGACGTC AACATGGCAT GGCTGTGGGC GCGTCTCAAG GCGCGCAGTT TCCGTCTTGG CTACTTCGTC GGGGGGTTCC AGGCGTTCTG TGATGCGCTG CTCGAACAGG TGCGCCGGCT TGGGGCGGTG GTGCATCTCG ATGCGCCGGT GGCGGCGCTC ACGCCGCTCG ACGATGACGT CTGGCAGGTG ACTGCTGGCG GCGCTCTGTC CGGTGCGGCA GAGGACGTCG ATGCGGTGAT TGTCACCGGT TCACCAACGT TGCTGGCGCG TCTGGCGCCA CACCTGCCCG CTGCGTATCT CAGCAATTTG CGCACGCTGC GCTCGATGGG GGCGGTGGTG CTGACGATCG CGCTGCGGCA ACAGTTGCTG ACCGATGGAA CATACTGGTT GATGCCACCC AAACGTGAGT TCCCCTTCCT GGCGCTGGTC GAACACACGA ATTTCATCGA ACCATCGCAC TACGGCGGCG ATCATCTGAT CTACTGCGGC GATTATCTTG ACCCTCATCA CGAGTATTTC CGCCTGACCG CCGAAGAACT ATTGCAACGA TTTCTCCCGG CGCTGGCGCG GGTCAACCCG CACTTCGATC CGTCGTGGGT GCGGGGATAC TGGCTCCACC GCGAACCCTA CGCACAACCG ATCGTTCCGG TCAACCATGC GCGGAACATC CCTCCACTGG CGACGCCGCT CCGCGGCCTG TTCTGGGCAA GCATGAGTCA GGTGTACCCC TGGGATCGCG GGACGAATTA TGCAGTCGAG TTGGGGCGTC GTGTGGCAGC GGAATGCCAC CGGTACGCCG GGATGATCCG GTTGCGCGGC GGCGGTGTGG CGCTGCGCAC GCAGTGA
|
Protein sequence | MKVAIIGAGV AGLTAAYDLA RRGHAVVVYE AASVAGGLAS GFRDELWEWP LERFYHHLFE SDTAIRSLVQ EIGFADRLFF RRPITAQWWN GRAYALDGVL PVLRFPAVPF IDRLRFGVVA AYLKYVTNDW QNLEKVTAAE WTSRWCGPRV YREIWRPLLE GKFGPHADDV NMAWLWARLK ARSFRLGYFV GGFQAFCDAL LEQVRRLGAV VHLDAPVAAL TPLDDDVWQV TAGGALSGAA EDVDAVIVTG SPTLLARLAP HLPAAYLSNL RTLRSMGAVV LTIALRQQLL TDGTYWLMPP KREFPFLALV EHTNFIEPSH YGGDHLIYCG DYLDPHHEYF RLTAEELLQR FLPALARVNP HFDPSWVRGY WLHREPYAQP IVPVNHARNI PPLATPLRGL FWASMSQVYP WDRGTNYAVE LGRRVAAECH RYAGMIRLRG GGVALRTQ
|
| |