Gene RoseRS_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0088 
Symbol 
ID5207021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp100102 
End bp101448 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content63% 
IMG OID640593720 
Producthypothetical protein 
Protein accessionYP_001274479 
Protein GI148654274 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.220394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.164147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTTG CGATTATTGG CGCGGGGGTT GCAGGATTGA CCGCCGCCTA CGATCTGGCG 
CGTCGCGGCC ACGCGGTCGT GGTTTATGAA GCAGCGTCGG TTGCGGGCGG ACTTGCTTCG
GGGTTCCGCG ATGAACTCTG GGAATGGCCC CTCGAACGCT TCTACCATCA CCTGTTCGAG
AGTGATACTG CCATCAGGTC GCTGGTGCAG GAGATAGGGT TCGCCGACCG TCTCTTCTTC
CGCCGACCGA TCACGGCGCA GTGGTGGAAT GGTCGCGCGT ATGCGCTCGA TGGCGTGCTG
CCGGTGCTGC GTTTCCCGGC CGTGCCGTTC ATCGACCGCC TCCGTTTTGG AGTGGTCGCT
GCGTACCTGA AGTATGTCAC CAACGACTGG CAGAATCTTG AAAAGGTGAC AGCTGCGGAA
TGGACGTCGC GCTGGTGCGG GCCGCGTGTG TACCGCGAAA TCTGGCGTCC GCTGCTGGAG
GGCAAGTTCG GTCCGCATGC CGATGACGTC AACATGGCAT GGCTGTGGGC GCGTCTCAAG
GCGCGCAGTT TCCGTCTTGG CTACTTCGTC GGGGGGTTCC AGGCGTTCTG TGATGCGCTG
CTCGAACAGG TGCGCCGGCT TGGGGCGGTG GTGCATCTCG ATGCGCCGGT GGCGGCGCTC
ACGCCGCTCG ACGATGACGT CTGGCAGGTG ACTGCTGGCG GCGCTCTGTC CGGTGCGGCA
GAGGACGTCG ATGCGGTGAT TGTCACCGGT TCACCAACGT TGCTGGCGCG TCTGGCGCCA
CACCTGCCCG CTGCGTATCT CAGCAATTTG CGCACGCTGC GCTCGATGGG GGCGGTGGTG
CTGACGATCG CGCTGCGGCA ACAGTTGCTG ACCGATGGAA CATACTGGTT GATGCCACCC
AAACGTGAGT TCCCCTTCCT GGCGCTGGTC GAACACACGA ATTTCATCGA ACCATCGCAC
TACGGCGGCG ATCATCTGAT CTACTGCGGC GATTATCTTG ACCCTCATCA CGAGTATTTC
CGCCTGACCG CCGAAGAACT ATTGCAACGA TTTCTCCCGG CGCTGGCGCG GGTCAACCCG
CACTTCGATC CGTCGTGGGT GCGGGGATAC TGGCTCCACC GCGAACCCTA CGCACAACCG
ATCGTTCCGG TCAACCATGC GCGGAACATC CCTCCACTGG CGACGCCGCT CCGCGGCCTG
TTCTGGGCAA GCATGAGTCA GGTGTACCCC TGGGATCGCG GGACGAATTA TGCAGTCGAG
TTGGGGCGTC GTGTGGCAGC GGAATGCCAC CGGTACGCCG GGATGATCCG GTTGCGCGGC
GGCGGTGTGG CGCTGCGCAC GCAGTGA
 
Protein sequence
MKVAIIGAGV AGLTAAYDLA RRGHAVVVYE AASVAGGLAS GFRDELWEWP LERFYHHLFE 
SDTAIRSLVQ EIGFADRLFF RRPITAQWWN GRAYALDGVL PVLRFPAVPF IDRLRFGVVA
AYLKYVTNDW QNLEKVTAAE WTSRWCGPRV YREIWRPLLE GKFGPHADDV NMAWLWARLK
ARSFRLGYFV GGFQAFCDAL LEQVRRLGAV VHLDAPVAAL TPLDDDVWQV TAGGALSGAA
EDVDAVIVTG SPTLLARLAP HLPAAYLSNL RTLRSMGAVV LTIALRQQLL TDGTYWLMPP
KREFPFLALV EHTNFIEPSH YGGDHLIYCG DYLDPHHEYF RLTAEELLQR FLPALARVNP
HFDPSWVRGY WLHREPYAQP IVPVNHARNI PPLATPLRGL FWASMSQVYP WDRGTNYAVE
LGRRVAAECH RYAGMIRLRG GGVALRTQ