Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0084 |
Symbol | |
ID | 5207017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 98370 |
End bp | 98693 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640593716 |
Product | HEPN domain-containing protein |
Protein accession | YP_001274475 |
Protein GI | 148654270 |
COG category | [S] Function unknown |
COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.395692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.270232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAA CTGAGTCCGC CCTGCCATCA GATTGGTTCG CCCAGGGTGA CCTGGACCTT CAAGCTGCAG AGATTCTGCT GACCCAAGAT GGGCCTCTTC CTGTTGTTGC CTTTCACCTC CAGCAAGCGG CAGAGAAGTA TCTCAAGGGC TTTCTACTCT CTGCTGGTTG GAAACTGCGT CGCATTCACG ACCTGGAAGT CCTGATCCTG GAAGCCACGG CTCGCGATTA TGATTTTGCT TCTTTCCTGG CGCCGTGTCA ACGAATCACG GAGTACTACA TCGAAACCCG GTATCCTATC GGTATCCATA CATCGTTTCA GTAA
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Protein sequence | MQATESALPS DWFAQGDLDL QAAEILLTQD GPLPVVAFHL QQAAEKYLKG FLLSAGWKLR RIHDLEVLIL EATARDYDFA SFLAPCQRIT EYYIETRYPI GIHTSFQ
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