Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0036 |
Symbol | |
ID | 5206969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 38053 |
End bp | 40281 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640593670 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001274429 |
Protein GI | 148654224 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGG CGTCGTTCTA CAGTCAATTT CGTGATGAAA CTGCGGAGAA CATCCGCATT GTCACCGAAG GTCTCATGGC GCTCGAAGAC AACGGGCTGG AGGGAGAGGC GCGCCGTGCG CAGATCGACG CCATTTTTCG CGCCATGCAC ACGATCAAAG GCTCGGCGCG GATGCTTGGG TTGGAAGCGG TTGGCAAAGT GGCGCACACC TGCGAACACA TTCTGGCGGC AGTCCGTGAT GGACGGCGCT CACTTGATCG TTTTCTGACC GATGAACTGT TGAAGGGGAG CGATGCAATC CTGGAACTGG TTGCGGCTGC AATTGACGGC AAGCCTTCGT CAATCGATGT TGATGCACTG ACGAGTCGGC TTGGGCGAGG CTTGCCGCAA CCGTCGCCTG CCGTCGAAAG TCCGGTTGCA CCCCTCGTTG AACCACACCC GCCGGTTGAT GAGGGTTCCT CGCCATCTCT GCCGCGCGGC GGGCGCGAAC GGGCGCGTCA GACGGTGCGC GTGCGGGTGG ATCGGCTGGA TCGGTTGCTA AACCTGGCGG GTGAACTGTC GATCGGCAGA CAGATCGAAG AGGCGCATCT TCAGGCGCTG GAAGAAGTGA AAGCGCTTGT TGAGCGGCAG CAACGCGCCC TGTTGACCCT TGAGTCGGAA TTACGGCGGA TGCGGCTGTC GCCAGCCCAG CGAGAACTCT TTGATCGCGA AATGAATGTC GCACTCAATG CAGGCGAGCG TGTCGGCGCG CTCGTCCGGA TGCAACTGGA ACGCATCGGA CAGCACAATA CCCATAAAGC GCAATTGATC GACGATCTCG AGCAGGAGGT CATGGCGATC CGTCTGACGC CGGTTTCCAC TCTCTACGCC AACCTTCCGC GAGCCGTGCG TGAACTGGCG CGCGATCTTG GCAAGGAAGC GACGTTGTTG CTGGCGGGTG AAACGACCGA ACTGGATCGC AAGGTTATCG AAGCGCTCGC CGATCCGATG GTGCATCTCA TCCGTAACGC CATCGACCAT GGCATCGAGC CGGTTGATGA ACGGGAGCGG TTGGGGAAGC CGCGCCAGGG AGTGATCGAG ATCGCAGCGC AGGCGCATGG CGGCAGAGTG CTGATTACGG TGCGCGACGA TGGGCGCGGC ATGGATCCGC AACAGTTGCG CGAGACGGCG GTGCGCAAAG GGTTGATCAG CAGCGAAGCT GCAACCGCGC TCTCGGATCA GGAGGCGCTG GAGTTGATCT TCATGCCCGG GTTTTCGACG GCAAAACTGA TCACCGATGT TTCCGGACGG GGCGTTGGGA TGGACGTGGT ACGCACCAAT CTTGCCGACA TCGGCGGCGA AGTGCAGGTC GAGTCGCAAC CCGGCATCGG CACGAAGGTG ACCCTTTCCT TGCCGCTGAC GCTGATCACC ACGCGGGTGC TGCTGATCGA AGCCGGCGGT CAACTGTTCG GTTTCCCGGC GTCTGGATGT CAGGGGACGG TATGGGTGCG GCGCAATCAG ATCCGCACCG TTGAGGGGCG GGCGGTCTTC CAGCATCATC AGACGCTCAC GCCGCTGCTC CGGCTGGACG AGTTGCTGGG AATTGCGAAC GGTCACCCGT TTGCCGCTGC AACGCGCGCA CCAGCGCTGC TGGTCGGCGG CGCACGGCGC CCTATGGCGC TGCTGGTTGA TCGTATGGTT GATGAACGCG AAGCAGTTAT CAAACCGCTG GGACCGCTGC TGGAGAAGCA GCGCCGCTAT AGCGGCGCAC TGCAGCTCGG CGATGGGAGG CTGGCGTTGC TGCTCAACCC GTCGATGCTC ATCCAGCTTG GGCGGGGGAC GGCGCTCATC GCGCCGACAC AGGATCAAAG TGCGCGGCGC CGCGCCCGGT TGCTGGTTGT TGATGACTCG TTCGCCACTC GCGAATTGAT CCGCAGCATT CTGAGCGCCG CCGGATACGA TGTGGCGACC GCCGTCGATG GACTCGATGC GCTTGACAGG TTACGCGCCG AAACCTACGA TCTCGTCGTC AGCGATGTCG AAATGCCGCG AGTGGACGGC TTCACCCTGA CCAGTCGCAT CCGCAGCGAA CTGGGCAAGA CCGACCTGCC GGTCATTATC GTGACCAGTC TCGCGTCGGA GGCGCATCGT CGGCGAGGGC TGGAAGTCGG TGCGCAGGCG TATATCGTCA AAAGTCAATT CAACCAGAAC AATCTGCTGG AGACGATCCA GCAGTTGATC GGCATGTGA
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Protein sequence | MDLASFYSQF RDETAENIRI VTEGLMALED NGLEGEARRA QIDAIFRAMH TIKGSARMLG LEAVGKVAHT CEHILAAVRD GRRSLDRFLT DELLKGSDAI LELVAAAIDG KPSSIDVDAL TSRLGRGLPQ PSPAVESPVA PLVEPHPPVD EGSSPSLPRG GRERARQTVR VRVDRLDRLL NLAGELSIGR QIEEAHLQAL EEVKALVERQ QRALLTLESE LRRMRLSPAQ RELFDREMNV ALNAGERVGA LVRMQLERIG QHNTHKAQLI DDLEQEVMAI RLTPVSTLYA NLPRAVRELA RDLGKEATLL LAGETTELDR KVIEALADPM VHLIRNAIDH GIEPVDERER LGKPRQGVIE IAAQAHGGRV LITVRDDGRG MDPQQLRETA VRKGLISSEA ATALSDQEAL ELIFMPGFST AKLITDVSGR GVGMDVVRTN LADIGGEVQV ESQPGIGTKV TLSLPLTLIT TRVLLIEAGG QLFGFPASGC QGTVWVRRNQ IRTVEGRAVF QHHQTLTPLL RLDELLGIAN GHPFAAATRA PALLVGGARR PMALLVDRMV DEREAVIKPL GPLLEKQRRY SGALQLGDGR LALLLNPSML IQLGRGTALI APTQDQSARR RARLLVVDDS FATRELIRSI LSAAGYDVAT AVDGLDALDR LRAETYDLVV SDVEMPRVDG FTLTSRIRSE LGKTDLPVII VTSLASEAHR RRGLEVGAQA YIVKSQFNQN NLLETIQQLI GM
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