Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0026 |
Symbol | |
ID | 5206959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 26915 |
End bp | 28282 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593660 |
Product | isochorismate synthase |
Protein accession | YP_001274419 |
Protein GI | 148654214 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.828763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATCGTA ACTCATACCA GCAACACTAC GGTCGCCTGA TCAGCATGAG CATGCCATGC CCTGGGGTGT CTCCCGCCGA TCTCCTGCAT GTTGCACGCG GACAACCGCG GTCGTACTGG GAGAGTGCGC GCGATGGGAT TGCATTCGCT GGCATGGGGA TCGCGGTTGA ATTGATGGCG TGGGGGGGCA ACCGTTTTGC CGGGATTGAA CAGCAGGCGC GGGCGTTGTT CGAACATGCA ATCATGATCG ATGAACATGA GCCGCTCGCC GCGCCGCGTC TCTTCGGTGG CTTTTCGTTC CGCGACGATT TTGTGCCTGA TCTGGCATGG GCTGATTTTC CGCCAGCGCA CTTTGTGTTG CCGCATTATC AACTGGTGCG TGTCCGCAAT TCCTTCTGGT TGACGTTGAA TGTCCATGCA CCGCTCAGCG AAGATCCGCG CACGCTGGCG CCCGATCTGC GCGAGGCGTT GCTGGCGCAG ATCGATCGGT TGCAGCGTGT ATCTTCTTCT CCTGCTGCTC GTCATTCATC AGGGCGTATT GTCTATCCCA TGCCGTTCGA TCAGTGGTCG CGCAGCGTGG AACGGATTGT GCAGCAGATC CGCGCTGGCG TTTTGAAGAA AGTTGTGCTG GCGCGTATCG CTGAGGCATC GTTCGACGAA CCGGCGGATG TTGATGGTGC ACTGGCGCAT CTGGAACGAC GCTATCCCGA TACCTATCGC TTTCTGTTCG AGCCGCGTCC AGGTCGTGCG TTCTTCGGGG CAACACCCGA ATTGCTGGTG CAGGTGAAGG GTGATCGGGT GATGACCATG GCGCTGGCTG GCAGCATCCG ACGTGGTGCG ACGCCCGACG AAGATGAGCG TCTTGCCGCA GTGCTGCTCG ATAGCGCTAA GGATCGCCAT GAACATCAGA TTGTGGTGGA CGAGGTGCGT GCTCGCCTGA CTCCACTGAC CCGTCATCTG GAAGTCGGTG CGACAGGTGT GATGACGCTG AGCAATATTC AGCACCTGCA TACGCCGATT GATGGGATAC TGCGCGAACC GCGCGGTGTT CTGCCGCTCG TCGCAACCCT GCACCCAACG CCGGCGCTCG GCGGTGAGCC ACGTGAGGCG GCGATGCGCC TGATCGGTGA ACTGGAACCG GCGCCGCGCG GATGGTACGC AGCGCCGGTC GGCTGGATCG ACCGACGGCT CGATGGACAG TTTGGGGTCG CCATTCGTTC GGCAGTCGTA CAAACGACAC GCGCCTGGCT GTATGCCGGG GCGGGTATCG TCGCGGCAAG TGATCCGCAG CGCGAGTGGG ACGAAACGAA CCTCAAGTTT CGTCCGATGC TGGAGGCGCT CGGTTTGCCC GCCGATGGGT ATCGGTAG
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Protein sequence | MHRNSYQQHY GRLISMSMPC PGVSPADLLH VARGQPRSYW ESARDGIAFA GMGIAVELMA WGGNRFAGIE QQARALFEHA IMIDEHEPLA APRLFGGFSF RDDFVPDLAW ADFPPAHFVL PHYQLVRVRN SFWLTLNVHA PLSEDPRTLA PDLREALLAQ IDRLQRVSSS PAARHSSGRI VYPMPFDQWS RSVERIVQQI RAGVLKKVVL ARIAEASFDE PADVDGALAH LERRYPDTYR FLFEPRPGRA FFGATPELLV QVKGDRVMTM ALAGSIRRGA TPDEDERLAA VLLDSAKDRH EHQIVVDEVR ARLTPLTRHL EVGATGVMTL SNIQHLHTPI DGILREPRGV LPLVATLHPT PALGGEPREA AMRLIGELEP APRGWYAAPV GWIDRRLDGQ FGVAIRSAVV QTTRAWLYAG AGIVAASDPQ REWDETNLKF RPMLEALGLP ADGYR
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