Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6165 |
Symbol | |
ID | 4036427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 134719 |
End bp | 135492 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_581974 |
Protein GI | 94152567 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00174882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAAAA TGCTTGGCAT GGCCGTGGCC ATGTCGACCC TATCCCTCTC CGCGATCGCC GGCGGTACTA CGACGGTGAA ATCGACTTTC CCGAACGTTG TACCTGTCGA GCAGGTTCGC CCGGCGGTCG AGCGCATCAA TGGCGCCGAC GGGGTCAAAC CCGGCGACAC ACGTACCGCC GCACCAGGTG CAAAGCTCAT GGAGTTCACG GTCTCGACCA AGACGACCAC GCCGCTCCTG GAGGTTGTCC GAGAGGTGAA GCTCGAGGCC GGCGACGCTT CCCTGTCCCT CAAGGCTGGC GCCCGCGTTG CGCCGGCGGC AAAGATCGTC GACAAGGAGG GGAGGACCTT CTATCTGGTC AAGGCCGCCC CTGAGAGCAG CTCGCTCTTC GCCCGGAATC GCTACTTCGC CATTACGGAC ACCGGCGCAG TACTCGAGAA CGCACTGAAG GCGACGGGAG ATACCTACGA GATGCAGGAA CCTGTCTCGA TCACCCCGGG CGACATGGTG ATCACCAAGT CTCGGACGAG CGGGCCAGCA CTCTGCGGCA TCTCAACCGT ATTCCTTGGC GCCAACGACG GCGTGGCGAA GTACCGCGTC CTTCGGACCG ATGCTTCCGG CCGAATCCGC GGCTCGCGCG ACTTGGCATA CATGAATGAT CTGCGGCTGA TTTCGATGGC CGGCACCCAT CTCGCGATCG ACAAGGTCGA GCCGAACTCG GTAAGTGTCC GTATCGTTGG CTCCACGCCG GCGGCCTGCA GTACCGCGAT CTAG
|
Protein sequence | MQKMLGMAVA MSTLSLSAIA GGTTTVKSTF PNVVPVEQVR PAVERINGAD GVKPGDTRTA APGAKLMEFT VSTKTTTPLL EVVREVKLEA GDASLSLKAG ARVAPAAKIV DKEGRTFYLV KAAPESSSLF ARNRYFAITD TGAVLENALK ATGDTYEMQE PVSITPGDMV ITKSRTSGPA LCGISTVFLG ANDGVAKYRV LRTDASGRIR GSRDLAYMND LRLISMAGTH LAIDKVEPNS VSVRIVGSTP AACSTAI
|
| |