Gene Rmet_6165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6165 
Symbol 
ID4036427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp134719 
End bp135492 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_581974 
Protein GI94152567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.00174882 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA TGCTTGGCAT GGCCGTGGCC ATGTCGACCC TATCCCTCTC CGCGATCGCC 
GGCGGTACTA CGACGGTGAA ATCGACTTTC CCGAACGTTG TACCTGTCGA GCAGGTTCGC
CCGGCGGTCG AGCGCATCAA TGGCGCCGAC GGGGTCAAAC CCGGCGACAC ACGTACCGCC
GCACCAGGTG CAAAGCTCAT GGAGTTCACG GTCTCGACCA AGACGACCAC GCCGCTCCTG
GAGGTTGTCC GAGAGGTGAA GCTCGAGGCC GGCGACGCTT CCCTGTCCCT CAAGGCTGGC
GCCCGCGTTG CGCCGGCGGC AAAGATCGTC GACAAGGAGG GGAGGACCTT CTATCTGGTC
AAGGCCGCCC CTGAGAGCAG CTCGCTCTTC GCCCGGAATC GCTACTTCGC CATTACGGAC
ACCGGCGCAG TACTCGAGAA CGCACTGAAG GCGACGGGAG ATACCTACGA GATGCAGGAA
CCTGTCTCGA TCACCCCGGG CGACATGGTG ATCACCAAGT CTCGGACGAG CGGGCCAGCA
CTCTGCGGCA TCTCAACCGT ATTCCTTGGC GCCAACGACG GCGTGGCGAA GTACCGCGTC
CTTCGGACCG ATGCTTCCGG CCGAATCCGC GGCTCGCGCG ACTTGGCATA CATGAATGAT
CTGCGGCTGA TTTCGATGGC CGGCACCCAT CTCGCGATCG ACAAGGTCGA GCCGAACTCG
GTAAGTGTCC GTATCGTTGG CTCCACGCCG GCGGCCTGCA GTACCGCGAT CTAG
 
Protein sequence
MQKMLGMAVA MSTLSLSAIA GGTTTVKSTF PNVVPVEQVR PAVERINGAD GVKPGDTRTA 
APGAKLMEFT VSTKTTTPLL EVVREVKLEA GDASLSLKAG ARVAPAAKIV DKEGRTFYLV
KAAPESSSLF ARNRYFAITD TGAVLENALK ATGDTYEMQE PVSITPGDMV ITKSRTSGPA
LCGISTVFLG ANDGVAKYRV LRTDASGRIR GSRDLAYMND LRLISMAGTH LAIDKVEPNS
VSVRIVGSTP AACSTAI