Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6140 |
Symbol | |
ID | 4036479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 158327 |
End bp | 160444 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_581949 |
Protein GI | 94152542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0593107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAT TGCTTGTTTC GGAGTGCCTC GACCTGACGG CACGCCGCGT TGCGCTCGAC CAGCGATATC GGGATCTGGT CGGGGTCAAT CAGACATCGA CGAACGTCTT CTCGGTCTTC GATGACGACG GCACGTTTCT CGGTGTCGTG ACGGACCGGC AGGCGACGCT TTTTCCAGCA CGGATTTTCG CGGATCTGAT CGCACGACGT CCACCCGAGC CCGTGCAGGG GCATGCCAGC GCGATCCAGT TGCTCAAGCG CATGCGTAAG GAAGCTTGTG AGCACCTACC CGTCTTCGAT GCGCAAGGGC GATACATCGG CATTGTCTCC ATGGCGTCCT TGCTGGCCGA GTTCGTTTGT CGCAGTGACA TCAATCGTCG TGAACGCGAG GCGCTGGTTA GCCAATTGCG TACTGAGCTG GAAAACCGCA AGATATCGGC CAATGTGCTC GAGTCAACTA GTGACGCGGT GCTGGTAACG GACGCTCGCT TGCGCATCCA GTACATCAAT CGTGCCTTCA CAGCCGCGAC GGGCTATCCC GGCGCGGATA TTGTCGGGCG GCCGGCCGGA TTCTTACGGT CTGGCCGGCA TGGACGGGGC TTCTACGCGG AGATATTTGC AACCCTGCGC GATGGCGGAC GCTGGGAAGG GGAGGTCTGG CTATTGCGGG CGGACGGCTC GATCGCGCCC GACTGGGTAA CGATCAAGAC GGTTCACGAC GAGCATGGCG AAGTGTTCAG TTTCGTGGCG ATGTTCGCGG ACATCATGCA GCGCGAAAGC CTGCGCGCCC AGTACATGCA CCTTGCCTAC TACGACAGCC TGACCGGTCT GCCAAATCGA CGCTTGTTCC AGGACCGGCT TGGCCATGCG ATCGAACGTT CGGCGAACAA GGGTACGGAA TTTTCCCTGC TTTTCCTTGA CCTCAACCGG TTCAAGGACG TGAACGATAC ACTGGGCCAC TCGTTTGGCG ATCGGCTACT CGAGGTGGTC GGGGAGCGCT TCAAGCGACT GGTGAAGGAA GCGGATTTTG TCGGCCGTAT CGGCGGCGAT GAATTCACAT TCATTCTGCA CGACACCGCG GATCCTGCTC AGGTCGAGTC GATCGCGCGG CGGATCTTCG ATGAACTGGC CAAGCCGATT GTCCTGAACG GTACGCAAAG CTACGTCTCC GCGAGCATTG GGGTCAGCCG ATTTCCCGCC GATGGCACGA CCGCAGAAGC GCTGATCATG AATGCCGATG CGGCGATGTA CCGCGCCAAG GAGGATGGCA TCGGCGCTTG TCATTTTTTT TCTCGCGGCC TGCATACGAA GGTGCTCAAG CGCCTCGACA TCTCCAACGC GCTGCACCGC GCGCTCGAGG CCAACGAATT TTCGCTGGCC TGGCAACCCC AGGTGTCGCT CACCACGGGC AAGGTCATCG GTGCGGAAGT CTTGCTCCGC TGGATGCGAG ATGGCAGCGT TCCCGTCTCG CCGGCCGAAT TCATTCCGGT AGCCGAAGAG ACCGGGGTAA TCGGCGCGAT CGGGGATTGG GTATTGCGCG AATCCTGTCG ATACGTCGCG AAGCTCGAGG CACTGGCGAT CGATCCGGAA TTCAGGGTGG CGGTGAACTT CTCGCCCTTG CAACTGAGTT GGCACAGGCA GGAGCCTGTG CTGCAGACTA TCGCGCAGTT TGGCGTTGAT TGTCGGCGCT TCAAGATTGA GCTGACGGAG AACGCGTTGT TCGTGCACGA GGAAGGGCTG CTAGAATTTG TGCGGGAGCT GGGCGCCGCG GGCGTCGGAA TTGCCATCGA CGATTTCGGG ACTGGATACA GCAATCTGTC CAGTCTGAAG CACTTACCGG TCACCGAACT CAAGATTGAT CGCGCCTTTA TCCATGACAT GCAAGGCTCG CACAGCGACA GGCAAATCGT GCAGGCCATG ATTAGCATGG CGCATATGCT TGGGCTGCGC GTCGTGGCCG AAGGGGTCGA GTACGTTTGG CAAGTGTCGG TGTTGCGGGA GTTTGGCTGC GAGGTGGGGC AAGGCTACCT GTTCAGCCGG CCGATCGACT TTGACGCGCT GGTCAAGCTA CTCGATGCGC CCGCCGTCGA CGTACAGGCG ATGCTTGCCG ACGGCTAG
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Protein sequence | MDTLLVSECL DLTARRVALD QRYRDLVGVN QTSTNVFSVF DDDGTFLGVV TDRQATLFPA RIFADLIARR PPEPVQGHAS AIQLLKRMRK EACEHLPVFD AQGRYIGIVS MASLLAEFVC RSDINRRERE ALVSQLRTEL ENRKISANVL ESTSDAVLVT DARLRIQYIN RAFTAATGYP GADIVGRPAG FLRSGRHGRG FYAEIFATLR DGGRWEGEVW LLRADGSIAP DWVTIKTVHD EHGEVFSFVA MFADIMQRES LRAQYMHLAY YDSLTGLPNR RLFQDRLGHA IERSANKGTE FSLLFLDLNR FKDVNDTLGH SFGDRLLEVV GERFKRLVKE ADFVGRIGGD EFTFILHDTA DPAQVESIAR RIFDELAKPI VLNGTQSYVS ASIGVSRFPA DGTTAEALIM NADAAMYRAK EDGIGACHFF SRGLHTKVLK RLDISNALHR ALEANEFSLA WQPQVSLTTG KVIGAEVLLR WMRDGSVPVS PAEFIPVAEE TGVIGAIGDW VLRESCRYVA KLEALAIDPE FRVAVNFSPL QLSWHRQEPV LQTIAQFGVD CRRFKIELTE NALFVHEEGL LEFVRELGAA GVGIAIDDFG TGYSNLSSLK HLPVTELKID RAFIHDMQGS HSDRQIVQAM ISMAHMLGLR VVAEGVEYVW QVSVLREFGC EVGQGYLFSR PIDFDALVKL LDAPAVDVQA MLADG
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