| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6139 |
|---|
| Symbol | |
|---|
| ID | 4036478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007971 |
|---|
| Strand | - |
|---|
| Start bp | 160541 |
|---|
| End bp | 161821 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_581948 |
|---|
| Protein GI | 94152541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT CAAAGGACAC CGCACCGCTG TCGAATGACA AGCCCCCGGC AGCCCCCGTG
CCGCTGCAGC GAGAATGGCT GAATCGCACC GTTGTCGGTG CCGGGCTCAC GAGTGCACTA
GGCGATTTCT GCTACGAGAC CACCACCGTC ATCCTGCCCG GCTTCCTGGC AATACTCGGG
ATCCCGGCGG CGGTTCTGGG ACTTATCGAA GGCCTGGCCG ATGCGGTGGC GAGCTTTACC
AAGATGATTT CGGGTTACGT CGCCGACAAG CTCGGACATC GAAAGCTTCT GGTGCTGGTC
GGCTACGCCC TGACGCCTGC GGGTCAGATC GCAATCGCAT TGGCCACGGC GTGGCCAATG
CTACTTGTGG GGCGAATCAT TTCCTGGTTC GGAAAAGGGC TGCGCGGCCC GCTTCGCGAC
GCGATTGTCA TCCAGGCAAT CCCGCCGCGC GCGCGAGGCC GTGCCTTCGG GTTTCATCGG
GCTATGGATA CGATTGGCGC AGTAGTCGGA CCGCTGCTTG GTGTCGCATT GCTTGGCTGG
GCCCAAAGCC ATCATGGGTG GAACGACCCC ATCGGTCCGT TCCGTCTGGT CCTATGGCTA
AGTGTCATCC CGGGGGTTCT GGCCGTCCTG GCTTTCCTCG GCTTCGTCAA GGATCCGGCA
TTTTCCCCAA ATCCCGGGCT GCGATTTTTC CGGGCCTTGC GCGGCCTTCC GCCAAAATTC
AAGCGCTATC TCGGCGCCGT CGGGTTGTTT GGCATGGGTG ATTTCTCCCA CAGCCTGTTG
ATCCTCGGCG CCACGAAATT GCTGACCCCC GCACTCGGCA TCGTGCAGGC CGCGCAAATC
GCCGGTGGCC TCTACGTCTG GCGAAACGTC GTGCAATCGG CGGCGTCATT TCCAGTCGGC
ATGCTGGCGG ATCGCGTCGG TGCGCTGCGC ATTCTCGTGC TTGGCTATGC GCTAGGCGCG
ATGACCGGCC TGCTCATGGC CATCACGTTC TGGCTCCACG TCAACACCCT CGCACTGCTC
GCGGCCGTCT TCCTGCTTGC GGGCCTGTAC ACGGCCGTCC AGGAAGCCCT GGAGCCGACG
GTGATCGCCG AGATGGTGTC GGCTGACACC TTGGCCATGA GCATCGGCGC GCTCGGCACC
ACGAACGGCA CGGCGAAGTT CATCTCGAGC GCCGGCGTCG GTCTCATCTG GTCGGCGCTA
TCACCTGTCC TCGGCTTCGC ATTCGCCACC ATCACCATGG CGGCCGGCAC AGTCATGCTG
GCGAGATTAC GGCACATCTA A
|
|---|
| Protein sequence | MTDSKDTAPL SNDKPPAAPV PLQREWLNRT VVGAGLTSAL GDFCYETTTV ILPGFLAILG
IPAAVLGLIE GLADAVASFT KMISGYVADK LGHRKLLVLV GYALTPAGQI AIALATAWPM
LLVGRIISWF GKGLRGPLRD AIVIQAIPPR ARGRAFGFHR AMDTIGAVVG PLLGVALLGW
AQSHHGWNDP IGPFRLVLWL SVIPGVLAVL AFLGFVKDPA FSPNPGLRFF RALRGLPPKF
KRYLGAVGLF GMGDFSHSLL ILGATKLLTP ALGIVQAAQI AGGLYVWRNV VQSAASFPVG
MLADRVGALR ILVLGYALGA MTGLLMAITF WLHVNTLALL AAVFLLAGLY TAVQEALEPT
VIAEMVSADT LAMSIGALGT TNGTAKFISS AGVGLIWSAL SPVLGFAFAT ITMAAGTVML
ARLRHI
|
|---|
| |