| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6112 |
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| Symbol | copA1 |
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| ID | 4036394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 189355 |
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| End bp | 191199 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | multi-Cu(II) oxidase CopA |
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| Protein accession | YP_581921 |
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| Protein GI | 94152514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0215079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.483267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGTG ATCGACTGTC TGGCATCTTG CTGCCCAACC TGCCACGCCG CCGTTTCGTA
CAAGGTTTGG CCGCCGGCGG GGTAATGGCG GGGCTGAGTG CTTTGGGCGG AACTGCGTGG
GCACAATCAT CGGGACTCCC CGAAAGCGCT TCATCCGGCA CCGCCCCGGT ATTGACGGGG
ACGGAGTTTG ACCTTGTCAT CGCCGAATCG GTTGTCAACT TTACCGGTAC GCCGCGGGTG
GCGACAACTA TCAATGGGAT GCTTCCCGGT CCGACGTTGC GCTGGCGGCA AGGCGACACC
GTGACGATCC GCGTCACGAA CCGCTTGCAC GAGCACACGT CAATCCACTG GCACGGCATC
ATCCTGCCGT TCCAGATGGA CGGCGTACCG GGAATCAGCT TTGCCGGTAT CGCCCCCGGC
GAGACATTTA CCTACCAGTT CAAGGTCGAA CAAACCGGCA GCTACTGGTA TCACTCGCAT
TCCGGCTTCC AGGAAATGAC CGGTGTGTAT GGCGGCATCG TGATTGATCC GGCCACCGGC
GTGGACGGTG TGCGAGCCGA CAGGGACTAC ACCATTCTGC TCTCGGACTG GACCGACGAG
GACCCCATGC GAGTCCTGTC GAAACTGAAG GTTCAGAGCG ACTACTACAA CTACATCAAG
CCCACCGTCT TCGATTTTTT CCGCGACGTT TCAAACGACG GTGTGAAGAG CGCTTTCGAG
AAGCGCAAGA TGTGGAACGA GATGCGGATG AATCCGACCG ACCTGGCGGA TCTTTCCGGT
GCCACACTGA CCTATCTGAC CAATGGCGTT ACCCCCGCTG GCAATTGGAC TGGCTTGTTC
AAGCCCGGTG AGAAGGTACG CCTGCGGTTC ATCAATGGGT CCGGGAATAC GTTCTATGAC
GTACGTATTC CCGGCCTGAA GCTCAAGGTC ATTCAAGTCG ACGGCCAGAA CCTGGAACCC
GTAAGCGTTG ACGAGTTCCG CTTTGGTCCC GGCGAGACCT ACGACGTGCT GGTGGAACCG
CGAGACGACG CCTATACGAT CTTCTCCCAA TCCATGGATC GCACTGGCTA CGCCCGCGGC
ACACTCGCGG TGCGCGCAGG ACTCAACGCC CAGGTGCCGG CCGTGGACAA GCCCGAGTGG
CTCACCATGA GCGACATGAT GGGTGGCATG GGTGGCATGG GTGGCATGGA CCACAGCAAG
ATGGACATGG GCGGCATGAA CCAAGGCAGC ATGGCTGGCA TGAACCATGG GGCCATGACC
ATGGACCATA GCCAGCACGC GATGGGCGGC ATGGCCATGG ATGCTTCGCT CAAGGTCCCC
AGCACGAAGG CTCGGCACGC CAAGACCGAA TATGGCGCGA ACACGGACAT GCGCGTGGAC
ATGGCCAGAA CGAATCTCGA CGACCCTGGC ATCGGTCTGC GTAACAACGG CCGCCGCGTT
CTGACGCTGG CCGATCAACA TACCATTGGC GGCCCCCTCG ACAAGCGCGG TCCTGCTCGG
GAAGTTGAAC TGCACCTCAC CGGCAACATG GAACGCTACT CCTGGTCAAT CGATGGTGTT
GAGTACGGCA AATCCACACC GGTCCGTTTC AAGTACGGTG AACGACTGCG CGTGATTCTG
CACAACGACA CGATGATGAC TCACCCGATG CACCTGCACG GCATGTGGAG TGAGCTCGAG
TCGCCTGACG GTTCGTTCCA GGCCCGGCGA CATACCATTC CGGTCCAACC TGCGCAGCGG
ATCAGCTTCC TGGTAACCGC CGACGCATTG GGCCGCTGGG CATGGCACTG CCACCTTATG
TTGCACATGG ATGCCGGGAT GTTCCGCGAA GTACTTGTGG CCTGA
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| Protein sequence | MRRDRLSGIL LPNLPRRRFV QGLAAGGVMA GLSALGGTAW AQSSGLPESA SSGTAPVLTG
TEFDLVIAES VVNFTGTPRV ATTINGMLPG PTLRWRQGDT VTIRVTNRLH EHTSIHWHGI
ILPFQMDGVP GISFAGIAPG ETFTYQFKVE QTGSYWYHSH SGFQEMTGVY GGIVIDPATG
VDGVRADRDY TILLSDWTDE DPMRVLSKLK VQSDYYNYIK PTVFDFFRDV SNDGVKSAFE
KRKMWNEMRM NPTDLADLSG ATLTYLTNGV TPAGNWTGLF KPGEKVRLRF INGSGNTFYD
VRIPGLKLKV IQVDGQNLEP VSVDEFRFGP GETYDVLVEP RDDAYTIFSQ SMDRTGYARG
TLAVRAGLNA QVPAVDKPEW LTMSDMMGGM GGMGGMDHSK MDMGGMNQGS MAGMNHGAMT
MDHSQHAMGG MAMDASLKVP STKARHAKTE YGANTDMRVD MARTNLDDPG IGLRNNGRRV
LTLADQHTIG GPLDKRGPAR EVELHLTGNM ERYSWSIDGV EYGKSTPVRF KYGERLRVIL
HNDTMMTHPM HLHGMWSELE SPDGSFQARR HTIPVQPAQR ISFLVTADAL GRWAWHCHLM
LHMDAGMFRE VLVA
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