Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6067 |
Symbol | tnpB |
ID | 4036543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 230984 |
End bp | 231841 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | transposase catalytic site ISRme15 |
Protein accession | YP_581876 |
Protein GI | 94152469 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.415785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCAGG TTGCCTCGTC GGCCTATCGG CGCCATGCCG CACGGCTGCG TGATCCGTCA CGGCGCAGCG ACCGTGCGCG TCGTGATGAA CGGCTCATGC CGCAAGTCCA GCGAGTGTGG CAGGAGAACC ATCGCGTCTA CGGCGCCGAC AAGGTCTGGC GGCAACTGAA CCGCGAGGGC GTGACGGTTG CCCGCTGCAC GGTCGAGCGA TTGATGCGCG CCCAGGGACT GCAAGGTGTG CGGCGCGGCA AGCGGCTGCG AACGACCATC GCTGACGACG CCGCCAGTCG CCCGGTGGAT CGCGTCAACC GGCAGTTCCG GGCCGACCGT CCCAATCAGC TCTGGGTCTC GGACTTCACC TACGTCTCGA CATGGCAGGG TTGGCTGTAC GTGGCCTTCG TCGTCGACGT CTACGCCAGG CGCATCGTCG GCTGGCGCGT GAGCAAATCC ATGACGACGG ACTTCGTGCT CGATGCGCTG GAGCAGGCCC TATACGCTCG CCAGCCTGGC AACGACGGTT CTCTGACCCA CCACTCCGAT AGGGGATCGC AGTACGTCAG CATCCGCTAT AGCGAACGCC TGGCCGAAGC CGGCATCGAG CCGTCGGTCG GCAGCCGTGG CGACAGTTAC GACAACGCCT TGGCCGAGAC GATCAATGGC TTGTACAAGG CCGAGCTGAT CCATCGCCGC GCGCCTTGGA AAACCAGGGA ATCCGTCGAA CTGGCAACAC TGGAATGGGT CGCTTGGTTC AACCATAAGC GCCTGCACTC ATCCATCGGC TATATCCCGC CCGCCGAGGC TGAGGCAAAC TACTACAACC AACTCGGCAA AACCGCCGAC GAGGCCGTTT TACTTTAA
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Protein sequence | MLQVASSAYR RHAARLRDPS RRSDRARRDE RLMPQVQRVW QENHRVYGAD KVWRQLNREG VTVARCTVER LMRAQGLQGV RRGKRLRTTI ADDAASRPVD RVNRQFRADR PNQLWVSDFT YVSTWQGWLY VAFVVDVYAR RIVGWRVSKS MTTDFVLDAL EQALYARQPG NDGSLTHHSD RGSQYVSIRY SERLAEAGIE PSVGSRGDSY DNALAETING LYKAELIHRR APWKTRESVE LATLEWVAWF NHKRLHSSIG YIPPAEAEAN YYNQLGKTAD EAVLL
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