| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5994 |
|---|
| Symbol | gntR |
|---|
| ID | 4036529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007971 |
|---|
| Strand | + |
|---|
| Start bp | 63811 |
|---|
| End bp | 64506 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | GntR-like protein |
|---|
| Protein accession | YP_581803 |
|---|
| Protein GI | 94152396 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.47604 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAA TCGAAGTGAG CCAAGTGGTC CGCACCAATG GGGCGAAGGA GCTCGCCCGC
TATCTGGTTG AGGAGATCAG CAATGGGACG TTAGCCGTGG GCATCAAGCT GCCGGCCGAG
CGAGAACTCA GCGAAAGATT CAATGCTTCG CGTGGCGCCG TTCGACGGGT CCTGGGAGAG
CTGAAAAGCC GTGGACTCAT CACGCAAGTG GTCGGCAGCG GGACCTTTGT GGCCGCGGTG
CCAGAGACAA CTCCTGCGGC TGGCAAGGGC ATTGGGGCGA TCAGTCCTGC TGAGTTGATG
CAGGCACGGC TCCTGATCGA ACCCATGCTG CCGTCGCTAA TAGTCCAGTA CGGGACGCCG
CAGGACTTCG CCCGCATGGA CGAATGTATC GAGCGCTCAG AAGCGGCGAA GACGGTAGAG
GAGTTTGAGC ACTGGGACGG GGCTCTGCAT GAAGCCCTTG CTGTGGCGAC GCACAACAAC
TTCATTCGGC AGATTCTGGA GCTGGCCACG CAAGTTCGCG AGCAAGGCGA ATGGGGGCGG
CTGAAGCAAC GTTCGCTAAC CCCTGAACGG CGCACCACCT ATGAGGACCA GCATCGGGCC
CTGGTGAATG CCCTGAAGGA CCGAGACGAG GCTACTGCGC GCCAAGTCAT AGAGCAACAC
TTGCTGCAGA TACAACGGAA CTTGTTCGGA CGCTAA
|
|---|
| Protein sequence | MSEIEVSQVV RTNGAKELAR YLVEEISNGT LAVGIKLPAE RELSERFNAS RGAVRRVLGE
LKSRGLITQV VGSGTFVAAV PETTPAAGKG IGAISPAELM QARLLIEPML PSLIVQYGTP
QDFARMDECI ERSEAAKTVE EFEHWDGALH EALAVATHNN FIRQILELAT QVREQGEWGR
LKQRSLTPER RTTYEDQHRA LVNALKDRDE ATARQVIEQH LLQIQRNLFG R
|
|---|
| |