Gene Rmet_5974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5974 
SymbolompP 
ID4036509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp86028 
End bp87095 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content60% 
IMG OID 
Productporin OmpC 
Protein accessionYP_581783 
Protein GI94152376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0182107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0474626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA GTCGCATTGC CGTCGCATCC CTCGGTCTGT TCGCTACAAC CGCATTCGCT 
CAATCGAGCG TCACGCTGTA TGGTGTGGCC GACGCGGGTA TCGAGTATCT GAGCAACGTC
CCATCGGCTT CGCCCGGTGG CTCGAACCAG GTTCGCATGA CCTCCGGCAA CATGTCGACG
TCGCGTTGGG GCCTGCGTGG CGTCGAAGAC CTTGGCGGCG GTCTGAAAGC CATCTTCGAA
TTGGAAAGCG GCATTTCGTT CGACACCGGC GCACAGAACA ACAGCACCCG TCTTTTTGAT
CGTAGTGCCT TCGTAGGATT GGGTAGCAAA TATGGTCAAC TGACGTTGGG TCGTCAAACG
ACACCAATGT ATGACACCAC GCTGCAACTC GACCCGATGG GCTTCGCGCC GCGCTACTCG
CTCTTCAAGA TGGATGACGT CTTGGCGGGT CGCGCTGACA ATGCTATCAA GTACCGTGGC
ATCTTCAGTG GCCTGACGGT CACCGGCCTC TACAGCTTTA GCCGCACCGG CGGCGGCGAA
GTGCCGGGGA ACTACAAGGT CGATCGAAAC ATGGGCGTAT CGCTCATGTA TGAAACCGGC
GCCCTCGCTG TCGGCGCGGT GTACGACGAG ATCCAGGGCA GCACCGTCGC CACGGCCGAC
CGCAAGGACC GCCGCGCTCT AATTGGCGCG AGCTACGCTT TCGGACCGGC TAAGGCATTT
ATTGGTTATC GCTGGTACAA CGGCAATGTC GGTGCGCTGC CGACGAACGG TTCTAACATT
TACTGGGCCG GCCTGCGCTA TGGCCTGACG CCCGCACTGA CGCTGACCGG CGCCGCCTAC
TACACGGACA GCCGCAATTC TGGCGCAGAC CCGTTCCTGT TCGTTGCCTC GGCAGATTAC
GCTTTCTCGA AGCGTACCGA TGTGTATATG AACGTCGGTT ATGCACTGAA CCGCGGCAAC
TCGCAGCTGG GCATGAACGG CTACAACTCG ACGACCGGCA GCCCGACCAA CGTTGTCCCT
GGCAAGGATC AGACCGGCGT CGTCGTAGGC GTACGCCACA AGTTCTGA
 
Protein sequence
MKISRIAVAS LGLFATTAFA QSSVTLYGVA DAGIEYLSNV PSASPGGSNQ VRMTSGNMST 
SRWGLRGVED LGGGLKAIFE LESGISFDTG AQNNSTRLFD RSAFVGLGSK YGQLTLGRQT
TPMYDTTLQL DPMGFAPRYS LFKMDDVLAG RADNAIKYRG IFSGLTVTGL YSFSRTGGGE
VPGNYKVDRN MGVSLMYETG ALAVGAVYDE IQGSTVATAD RKDRRALIGA SYAFGPAKAF
IGYRWYNGNV GALPTNGSNI YWAGLRYGLT PALTLTGAAY YTDSRNSGAD PFLFVASADY
AFSKRTDVYM NVGYALNRGN SQLGMNGYNS TTGSPTNVVP GKDQTGVVVG VRHKF