| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5879 |
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| Symbol | |
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| ID | 4042743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 75595 |
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| End bp | 76494 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981298 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_588007 |
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| Protein GI | 94314798 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.927972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGA ACCTGTCGGT CAAGCACCTG CGCGCTTTCG TTGCGCTGGC CACCCATCGC
AATTTCACGC GCGCGGCGCA GGCGTGCCAC CTGTCCCAAT CGGCATTCAG CGCGTTGATC
CAGACGCTCG AGGAACAGGC GGGCTGCCGG CTTTTCGAAC GCACCACACG ACATGTGGAC
CTGAGCACCG ACGGGCGCCG ATTCGAGGAG ATGGCGCGTC GGCTGCTGGG CGATTTCGAA
GCGGCCTTCG ATGATCTGCG CGACCATGCC GAGCGCCGCA AGGGTCGCGT GGCGATCGCT
GCGCTACCGT CGCTCGCGGG CGGCGACCTG CCGCCGTTGC TGGCCAGCTT CCACCAGCAA
TATCCCGGTA TCGCGCTCGA ACTGCACGAC CAGCTCGCCG ACGGCTGCAT CGAGTTTGTG
CGACGTGGAC AGGCCGACTT CGCGCTGGCG CCCGCGCCGG CCCAGGACGC CGACCTGCGC
GTCGAAGCGC TGGTGCGCGA TAGTTTCCAT CTGGTCTGCC CGGCCGATCA CCCGCTGGCC
GGGAAGCGGC GCGTTACGCC ACAAGCCCTG GCCGGACTGC CATTTATCCA GCTGTCGCGC
ACCAGCAGCG TAAGGCAGCA CCTCGATGCA GCACTGCATC CACTCAAGCT GAACGGGGTC
ATGGAAGTCG AGCACCTGGC TACCGTGGCG GCGCTCGTCG AGGCGGGTCT GGGCGTGTCG
GTCGTGCCAG CGCTGGCGCT ATTCCAGTTC CGGCGCGAAG GGCTGGCCAT CCGGCCCATG
CAAATGCCCA CGCTGGTGCG CGACATCTGC GTGGTACGGC TCAAGGATCG GGGCGATTCG
GCGGCGGCAA CCGCGATGCT GGATTGCCTG CGCGCGCATT ACCGGAGCGG CAGGCGCTAG
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| Protein sequence | MLSNLSVKHL RAFVALATHR NFTRAAQACH LSQSAFSALI QTLEEQAGCR LFERTTRHVD
LSTDGRRFEE MARRLLGDFE AAFDDLRDHA ERRKGRVAIA ALPSLAGGDL PPLLASFHQQ
YPGIALELHD QLADGCIEFV RRGQADFALA PAPAQDADLR VEALVRDSFH LVCPADHPLA
GKRRVTPQAL AGLPFIQLSR TSSVRQHLDA ALHPLKLNGV MEVEHLATVA ALVEAGLGVS
VVPALALFQF RREGLAIRPM QMPTLVRDIC VVRLKDRGDS AAATAMLDCL RAHYRSGRR
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