Gene Rmet_5830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5830 
Symbol 
ID4042694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp18170 
End bp19339 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content62% 
IMG OID637981249 
Producthypothetical protein 
Protein accessionYP_587958 
Protein GI94314749 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGGC GCAGCGGGTT TCTCCGTAGG AGGACGCAGG GAGCCATTGC AGGATCTGTA 
GCGACGATTT GCGCACATAG CAATGGGCGT GTGAATCTCC GCTGTGCGGC GCACAAGAGC
CCGCCTGCGA CGACGGCAAG TGACGCTGCG GTAACGCCCG GATTCAAACC GGAGGCCCAT
AATGGCGGCC TCGATTCACG GACACGGTTC GCACGCCACG CGCTGCGCTG CTCCGACTCA
ATAACTACAG GGGGCCCCTT GGCCGCTACC GAAAATACTG GCTCGCAATC ACAGCCACAA
TCGCAATCGC CTGCCGACCT CACGGCTCTG CCCGACAACC CGGACCTGGT ACCGGGCATG
CCATATCGCC ACTACAAGGG TGGCGCCTAT CTCGTGACCG GGGTTGGCCG TTTCGAAGCC
GACATGACAC CGGTCGTGGT GTACGAATCC ATGCGTGACC GCTCGCTGCT CTGGGTACGA
CACGCCGACG TGTTCACCGA GCCCGTCTCG ACCGCGACGG GCGACGTCGC CAGATTCGCG
CCGCACTGGG CACCGGCCTT GTCGTGTCTG GACTTCCTGC CACGCAAGAC GGTCCTTCAG
GTACTGGCCT TGTACGATGC GCCGTACCGC AAATACCATG ACCGGCGACA CGTGCTGGAG
ATGTTCGAGC AAGCCCACGC ACTCGGCATC GCACTCAATC CTGCGCAAGC GCTGGCCGTC
CTGTTTCATG ACGCCGTGTA CGTCCCGGGC TTCGAGCACA ACGAAGCGGC CTCGGCGGCC
TTGCTCGACA CCATGGTCGA GGACGTGAAC GCCGACGTGA TTCACCTTGC AAGGCAGATC
ATTCTCGACA CCCGCACGCA TGAAGCAAGC GTGCCCGACG CCGCAACGGT CCTGGATCTC
GATCTCCTCC GTCTGGCCGC CGACGATGAT GTCTTCGACG CGCATGGGCT AGCCGTATTC
GATGAGAACC GCGGCTTGCT GGCGAGCAGG GTCCAACTTT CCGGCGAGGC GCTGTATCAC
GCATTCATGG TTCGCCGCGC GGCATTCCTC GGGGCACTGG CGCAACGGCC GAAACTGTTT
TTGACGACGG CATTCGCCGA ATTCGAAGGT CCGGCTCGTC GCAATATCGC AAGAGTTCTT
GCAAGCTTCG GGCAAGCGAA AGCCAACTGA
 
Protein sequence
MVRRSGFLRR RTQGAIAGSV ATICAHSNGR VNLRCAAHKS PPATTASDAA VTPGFKPEAH 
NGGLDSRTRF ARHALRCSDS ITTGGPLAAT ENTGSQSQPQ SQSPADLTAL PDNPDLVPGM
PYRHYKGGAY LVTGVGRFEA DMTPVVVYES MRDRSLLWVR HADVFTEPVS TATGDVARFA
PHWAPALSCL DFLPRKTVLQ VLALYDAPYR KYHDRRHVLE MFEQAHALGI ALNPAQALAV
LFHDAVYVPG FEHNEAASAA LLDTMVEDVN ADVIHLARQI ILDTRTHEAS VPDAATVLDL
DLLRLAADDD VFDAHGLAVF DENRGLLASR VQLSGEALYH AFMVRRAAFL GALAQRPKLF
LTTAFAEFEG PARRNIARVL ASFGQAKAN