Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5743 |
Symbol | |
ID | 4042607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2504148 |
End bp | 2505851 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637981162 |
Product | putative acetate-CoA ligase |
Protein accession | YP_587871 |
Protein GI | 94314662 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG GGGCATCAGG AGCCGCAGCA TTCGTCGCCG CACGGGACTT TCTGCTGCGA CATCGCGCGG ACTACGATCG CGCATATGGG GAATTTGCCT GGCCACAGCT CGGCGAGTTC AACTGGGCGC TCGATTACTT CGACGTCATG GCGCAGGGAA ACGACAATCC CGCACTCTGG ATTGTGGACA GCCCCAATGA TGCAGGCGCG CCATTGTCTT TCAGGGAGAT GTCGGAGCGC TCTTCTCGCA TGGCCAACTA CTTACGCGGC TTGGGTGTCT CGCGCGGCGA CCGGCTCCTC CTGATGCTGC CCAATCGGGT CGAGTTGTGG GATGTCATGC TGGCGGCGAT GAAGCTCGGT GCCGTTGTGC TGCCTGCCAC GACCCAGTTA TCTCCCGACG ATGTTCGCGA TCGCGTGCAA CTCGGCGAGG CGCGGTTCGT CGTGGTCGAC GGTGCGGAGC TGGGAAAATT CGAAGATGTT GACGCGAGCG TCACCCGTAT CGCGGTGGGC GAGCGCGTCG CAGGGTGGCA TCACATTGGT GACGCGTATC AGGCGTCGCC AACCTTCGTC CCGGACGGGG TAACCCGCGC GACGGATCTG CTGCTCCTGT ATTTCACGTC GGGCACGACA TCGAAACCAA AGCTGGTCGA ACACACGCAT CAGAGCTATC CCGTTGGCCA CTTGTCGACG ATGTACTGGA TTGGGCTCCA GCCCGGGGAC ATTCACTGGA ACATCAGTTC CCCGGGATGG GCCAAGCACG CATGGAGTTG CTTCTACGCG CCGTGGAATG CCCAGGCGTG CGTCTTCATC TACAACTTCG CCCGCTTCGC TCCGAGGGAT GCGCTGGACG TGCTCGTGCA ACGCAACGTC ACTACGCTCT GCGCCCCGCC AACGGTATGG CGAATGCTCG TGCAGGAGCC GTTGGCTTCG TATGCGGTAA AGCTGCGCGA GATCGTCGGG GCAGGAGAAC CGCTCAACCC GGAAATCATC GAGCGGGTGC AGAGCGCGTG GGGCATCACC ATTCGCGACG GATTCGGGCA GACCGAGACA ACCTGCCAAA TCGGCAATCC GCCGGGTCAG CCCGTCGTGC CAGGCTCGAT GGGCAGGCCG CTTCCCGGGT ACCGTGTCGA TCTGGTGGAT CTGGATGATC ATCCCGCAAA CGAGGGCGAG ATTGTCCTCT CGCTGGCCAG CCGCCCGCTT GGATTGATGG CGGGCTACTC GAACAACGAG AAGGCGACTG CGGAAGCCAT GCGCAATGGC TTCTATCACA CGTCCGATAT CGCGATGCGC CGGGACGACG GGTACCTTGT CTACGTGGGT CGCGCGGACG ATGTCTTCAA GGCATCGGAC TACCGGCTGA GTCCATTCGA GCTGGAGAGC GTCCTGATCG AACACGAGGC CATTGGCGAG GCCGCCGTTG TGCCGAGCCC GGACCCGGTA AAGCTGTATG TGCCGAAGGC CTATGTCACG GTTCGCCAGG GCTACGAGGC TGGCCCCGAA CTGGCCAGGG CGGTATTCCG CTTTTCGAGA GAGAAGCTCG CTCCGTACAA GCGGATTCGC AGGCTGCAGT TCAGCGAGCT ACCCAAGACG ATCTCCGGAA AGATCCGGCG CGTTGACCTC CGCCGCCGCG AGATGGAGCG CGAGGATCAG TCGTCGAGGA TGCCCGGTGA ATACTGGGAG GAAGATTTCC CCGACTTGCG TTGA
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Protein sequence | MKDGASGAAA FVAARDFLLR HRADYDRAYG EFAWPQLGEF NWALDYFDVM AQGNDNPALW IVDSPNDAGA PLSFREMSER SSRMANYLRG LGVSRGDRLL LMLPNRVELW DVMLAAMKLG AVVLPATTQL SPDDVRDRVQ LGEARFVVVD GAELGKFEDV DASVTRIAVG ERVAGWHHIG DAYQASPTFV PDGVTRATDL LLLYFTSGTT SKPKLVEHTH QSYPVGHLST MYWIGLQPGD IHWNISSPGW AKHAWSCFYA PWNAQACVFI YNFARFAPRD ALDVLVQRNV TTLCAPPTVW RMLVQEPLAS YAVKLREIVG AGEPLNPEII ERVQSAWGIT IRDGFGQTET TCQIGNPPGQ PVVPGSMGRP LPGYRVDLVD LDDHPANEGE IVLSLASRPL GLMAGYSNNE KATAEAMRNG FYHTSDIAMR RDDGYLVYVG RADDVFKASD YRLSPFELES VLIEHEAIGE AAVVPSPDPV KLYVPKAYVT VRQGYEAGPE LARAVFRFSR EKLAPYKRIR RLQFSELPKT ISGKIRRVDL RRREMEREDQ SSRMPGEYWE EDFPDLR
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