| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5658 |
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| Symbol | |
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| ID | 4042522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2416842 |
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| End bp | 2418029 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981077 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_587786 |
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| Protein GI | 94314577 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0922182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTCT GCAACCAACT ATCCCTGATC AACCCCGCGG TCTCGCTGAT CTTCGCTGGC
TGCTTCCTCG TGGTCTGGCG GCAGCTCCGC AGCCAGCATC TGCTGGCGTT CGGCGTGTCC
TTTGCGCTCT ATGCCGTGGC GGTGGCCATA CAGGTCCTGT CTCCGCCGAG CGATGCTGTC
TGGACGACGC TCGTCGCCGC GCCGTTCTAC ATCGGCAGCA CGATGCTGAT TGCGTGCGGA
TTGCTGTGGC GCGCCCATGT CAAATCCACC ACCGCACTGG CCGCCTGTTC GGGGGTGGCC
ATTGTCGAGT TCTCGCTGCT CGCCTACTTC CATTTCGCCG TGCCTGACCT GACGGCGCGG
ATATACGTAC ACAACATTGG CGCCGCGCTG ATCTTCGGCA TTGCCCTGGC TCAGCTTGGT
GGCTTGCGGC GGGGCAGCGT GGCGGATCGG GCGATCTACT GGGTGTTCGT CGCCTTTACC
GTGAACCTCG GCCTGCGGCT GCTGCTGAGC ACGAGCGCAC CCCCGAACAC CGACGAATGT
GGCAGGGCGT TTTCAAGCTA TTGGACGTAT TTCCAGGTAG GCCAGACGCT CTTTAACGTC
TTCTTCAGCC TGGTGCTGCT GGGCTCCGAG ATTCACGCGC TGATCGAACG GATCCAGCAC
GAGCGGGATA CGGATGCGCT GACGCGGCTT CACAACCGGA GAAGCTTCGA GGAAATCGCG
CGCGAGACGA TTTCGCGGGC CAATGGCGGG GTGCCCGGAC TGATCCTGGT GGACCTTGAT
TTCTTCAAGC TCATCAACGA CAACCACGGT CACGCCAGTG GCGACGCGAT ACTCGTCGAG
TTCGCGCGGA TCGTCAGGCG CGTGGTGGGC GCGCGGGGGA TTGCCGGCCG GCTTGGGGGC
GAGGAGTTCG CGGTGCTATT GCCGCGGACG ACCGGGGAAG AGGCGATCCA TATCGCCGAA
GAGATCCGGG CGACGCTCGA GCGCGCGCGA TTCGAGACGC TGCCGGATAG CCCGCGTGTG
ACGGCCAGCT TTGGTGTGGC GGTGTGGCAA CCGCCGGAGT CGCTCGATGC GCTGATGTCG
CGTGCCGACG GGCTGCTCTA TACCGCAAAG CGCAGCGGTC GCAATCGCGT GCACCACGCG
CACGAACAGA CGTCGATGCA GGAAGTGGGC AGCGAACGGC TGCCCTGA
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| Protein sequence | MSFCNQLSLI NPAVSLIFAG CFLVVWRQLR SQHLLAFGVS FALYAVAVAI QVLSPPSDAV
WTTLVAAPFY IGSTMLIACG LLWRAHVKST TALAACSGVA IVEFSLLAYF HFAVPDLTAR
IYVHNIGAAL IFGIALAQLG GLRRGSVADR AIYWVFVAFT VNLGLRLLLS TSAPPNTDEC
GRAFSSYWTY FQVGQTLFNV FFSLVLLGSE IHALIERIQH ERDTDALTRL HNRRSFEEIA
RETISRANGG VPGLILVDLD FFKLINDNHG HASGDAILVE FARIVRRVVG ARGIAGRLGG
EEFAVLLPRT TGEEAIHIAE EIRATLERAR FETLPDSPRV TASFGVAVWQ PPESLDALMS
RADGLLYTAK RSGRNRVHHA HEQTSMQEVG SERLP
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